Gene Cla_0558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_0558 
Symbol 
ID7411118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp530448 
End bp534008 
Gene Length3561 bp 
Protein Length1186 aa 
Translation table11 
GC content26% 
IMG OID643717689 
Producttype II restriction-modification enzyme 
Protein accessionYP_002575143 
Protein GI222823569 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTTTG ATTTAATACC ACTTCAAGAA TTCATCAAAA ATAATGTAAA AATACCAACT 
AAAGACATCA TAAAAGATTT TAAAGTCAAA ATAAATGAAT TTTTATCTCA AACTTCAAAA
GCAAACGAGG AAGATTATCA AAAAAAAGAA ATATCAAATT TTTTAGAGAC AACATACAAC
TACAAAACAA ACATAAAAGG CAATATAGAT TTAACTATAT ATGTAGATGA TATTGCAAAT
GTTATATTTG AAATAAAATC CACTATAAAC AAAAAAGAAT TCCCACAATC AAACCAAGAT
TTATCATCTA AAGCATTTTA TGAAAGTGTT TTGTATTTTT TAAGAGAGAG AAAAGGCAAT
AAAAACAATT TTATAAAATT CATCATTATT TGCACTGCAA AAGATTTTTT TATCATAGAT
GCAAGAGAAT ATGAAAAATT ATTTGAAAAT GATAAAACTA TTATCAGGCA TTATAAAAAT
TGCGATGAAA AACAAGGCAC TAACACAAAA ACACAAGAAT TTTATGATCA GCTTTCATCT
TATTTGAAAA CTCTTGATAA AAACTTAAAA TACACACATT TTGAACTAAG AGATGATTTA
GACGAAACAA CGCTTAGTTA TATTTATCAA ATTCTCTCGC CGCAAGTTTT GTTAAAAGAA
AAAATAACCC AAGATGCTAA CGCTTTAAAT GGAAATTTTT ATAAAGAATT ACTTTATATA
CTAGGTTTAA AAGAAGAGGA AGATAAAAGC AAAAAAATCA TCTTATCAGA CACTCCAAAC
ACACTAAGCC ATGCTATAAG ACAAACTTAT AAGGATATAG GCTTTGATGA TATTTTTGCT
CTTTTAATTA CTTGGAATAA TAGAATTTTA TTTTTAAGAT TATTTGAGTC TATGCTTTTA
TCTTTTAACC ACATAAAAAA ACCTTTCTTA ACAATAGAAA AAATTCCAAA TTTTGCAAAA
TTATCCGAAC TTTTCTTTGA AGTTTTAGCC AAAAAAGAAA ACCAAAGAAG TATTAAAGAA
TTTGATTTTA TACCTTATTT AAATTCGTCT TTATTTGACA AAAATACACA AGAACAACAG
CACAAAGACA TAAAATTACT TGATTCTAAA CCACTTGAAA TTTTTCCAGA CTCTAAATTA
TCACAAGAAT ACAAAAACTT AAAATCCTTA CCACTTTTAG AATATCTTTT TGCATTTTTA
AGAACTTACG ATTTTACCAC CACAAGTAAA GACATACAAG ATAATCAAAA AATCAACCAC
GATAAACTCA TAAATGCAAG TGTTTTGGGA AATGTTTTTG AAAAGCTAAA TGGCTACAAA
GAAGGAAGCT ACTATACACC AAGTTTTATC ACTTCATACA TGTGCAAACA AAGTATAGAA
AAAGTCGTGC TTGATAAATT CGAACAAGAG TATGCTTTAA AAGCAAGCTC GATAAGCGAT
TTAAGAGCAT TAATCGATAG AAATTTCACT CTAGAAAAAC AAAAAGCCTA TCTTGATGCC
ATACTAAGTA TAAAAATCTG CGATCCAGCT GTAGGAAGTG GGCATTTTCT AGTTTCAGCT
TTAAATGAGC TTGTTTATAT TTTATATCAA CTAGGACTTA TAAAATCTTT ACTTAGAGAA
AAGCTAATCC TAGAAAATGA TGAGCTTATC ATCTATACTA ATGATAAAGG AATTTTTAAT
TACCAAAAAC CAAATTTTCA AAACGACCCT ATTCATCAAA TTCAAAAAGA GCTTTTTGAG
TGCAAAAAAC TCATTATAGA AAATTGTCTT TTTGGGGTAG ATATCAACCC TAACTCATGT
GAGATTACTA AACTAAGACT TTGGATAGAG CTTTTAAAAT ATAGCTTTTA TATCTTTGAA
AATGACAAAA ACACAAATAC ACTTCAAATT TTACCAAACA TCGACATCAA CATAAAATGC
GGGAATTCTT TAATAAGTAA AATACCTACA AACGAACCTT TGATGTTACA AACACAAGAA
AGTGTAAAAT TATATAAGCA ATTAGAAGAT GATTATTATA ATGGTTTATA TACAAATAAA
GAAGAACATT TAGAAAAAAT AAACAAAATC AAATCAAATT TTATAAAAGC ATACATTAAT
ACAAAACACA CAAAAGAAAT AAAAGATTTT TATAAAAAAT GTGAAGAATA TGCAAAAAAT
TACGAAGATT TTGGTTTAAA TACTCTACCT AAAGAATACG AAGAGTTAAA AATGCGCATA
CAATGCCAAC TCATAAATTT ATCACTTTTT AATGTCGCAG ATATAGACAA AGAAAAAGCT
CTAAAAGATT TAGAAGCCTT GAAAGAAAAA TATGATGAAA TTTTTTATGG TTTTGAATGG
CGTGTGGAAT TTTCTAAAAT TTTATATTCT TCTTTAAGTA AAGAAGAAAT AACAAGCAAT
AATTTATCCA AGCGAAAAGG AAATTTTAAA AATTTACATA AAGACAAGGA AGGAGAATTT
CAAGGTTTTG ATTTGATTAT AGGCAACCCA CCATATATAA GTATTTTAGA CTTATCAAAA
ATTGACAATT CTAAAATATA TAAAAAATTC TATCCTGAAA TTAAAGGTGC TTACGATATA
TTTATTTTAT TTATAATAAA AGGATTAGAG CTTATCAAAA AAAATGGATG TTTTTGTTGG
ATTATTCCTA ATAAATTTCT TATTTCTCAG TATGCTCAAA GCACTTATGA AATGTTACTT
AAAAAGAAAT TTTTAGAAAA AAGCATTGAT GTTTCAAATT TAAATGTTTT TAAAAATGCT
TCTGTTTATC CAATAATAAT ATTTGGGCAT AACGAAACAG AATTTACAAA ATTCATAGCT
CTCGATCAAG ATGATTTAAA AACAAATAAT CTACAAATAG TTGATAGTGA AAATATATGG
AATAAATTCA AAACTTTTAA AGAATGTGGA ATAAAAATAC AATCAGGACT TACTGGTTTT
CAAGCACATT CTATAGTAGA ATATCTTAGC GAGAAAAAAA CAAAAAATAG CATGCGATTT
ATTGTCAGTG GTTCCATTGA TAGATATAAA ATAGACAGTG ACAAAGTAAG ATATATGAAT
AAAACATACA ATAACCCATA TATTAAAAAA AATAATGTAA TTTCCGAAGA TAAATGGAAT
TTTTGGAATA GTGAAAAAAT AATTATTGCT GGGATGACAA AAAAACTAGA ATCTACTTAT
TGCAAACATC CAATAGCCAT AGGTGTAGGT GTTTATGCTA TTTATGACTT TGCAAATGTT
AATCCACTAG TGCTTTTAGG AATTTTAAAT AGCAAATTTA TGAATTATGT TTTTATAAAT
ATGTTTAAGG ATAAACATCT TGCAGGCGAT TATTTATCAA TCAATAAAAA CAACTTAGAA
TGTTTGCCTA TATTTGATAT AAATTCTAAA AATGAAAAAC TAGCAAACGA GCTTATAAGC
TTAGTTGATG AGGTTTTAAA TTTAAAAGAA CAAGACAAAA ATACAAACAC CAAAACCCAA
GAAGACAAAA TAAACTCTAT CGTTTATAAA CTTTACAACC TAAGCAAAGA AGAAATAAAA
ATCATTGAAG GCAAACAATG A
 
Protein sequence
MRFDLIPLQE FIKNNVKIPT KDIIKDFKVK INEFLSQTSK ANEEDYQKKE ISNFLETTYN 
YKTNIKGNID LTIYVDDIAN VIFEIKSTIN KKEFPQSNQD LSSKAFYESV LYFLRERKGN
KNNFIKFIII CTAKDFFIID AREYEKLFEN DKTIIRHYKN CDEKQGTNTK TQEFYDQLSS
YLKTLDKNLK YTHFELRDDL DETTLSYIYQ ILSPQVLLKE KITQDANALN GNFYKELLYI
LGLKEEEDKS KKIILSDTPN TLSHAIRQTY KDIGFDDIFA LLITWNNRIL FLRLFESMLL
SFNHIKKPFL TIEKIPNFAK LSELFFEVLA KKENQRSIKE FDFIPYLNSS LFDKNTQEQQ
HKDIKLLDSK PLEIFPDSKL SQEYKNLKSL PLLEYLFAFL RTYDFTTTSK DIQDNQKINH
DKLINASVLG NVFEKLNGYK EGSYYTPSFI TSYMCKQSIE KVVLDKFEQE YALKASSISD
LRALIDRNFT LEKQKAYLDA ILSIKICDPA VGSGHFLVSA LNELVYILYQ LGLIKSLLRE
KLILENDELI IYTNDKGIFN YQKPNFQNDP IHQIQKELFE CKKLIIENCL FGVDINPNSC
EITKLRLWIE LLKYSFYIFE NDKNTNTLQI LPNIDINIKC GNSLISKIPT NEPLMLQTQE
SVKLYKQLED DYYNGLYTNK EEHLEKINKI KSNFIKAYIN TKHTKEIKDF YKKCEEYAKN
YEDFGLNTLP KEYEELKMRI QCQLINLSLF NVADIDKEKA LKDLEALKEK YDEIFYGFEW
RVEFSKILYS SLSKEEITSN NLSKRKGNFK NLHKDKEGEF QGFDLIIGNP PYISILDLSK
IDNSKIYKKF YPEIKGAYDI FILFIIKGLE LIKKNGCFCW IIPNKFLISQ YAQSTYEMLL
KKKFLEKSID VSNLNVFKNA SVYPIIIFGH NETEFTKFIA LDQDDLKTNN LQIVDSENIW
NKFKTFKECG IKIQSGLTGF QAHSIVEYLS EKKTKNSMRF IVSGSIDRYK IDSDKVRYMN
KTYNNPYIKK NNVISEDKWN FWNSEKIIIA GMTKKLESTY CKHPIAIGVG VYAIYDFANV
NPLVLLGILN SKFMNYVFIN MFKDKHLAGD YLSINKNNLE CLPIFDINSK NEKLANELIS
LVDEVLNLKE QDKNTNTKTQ EDKINSIVYK LYNLSKEEIK IIEGKQ