Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0558 |
Symbol | |
ID | 7411118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | - |
Start bp | 530448 |
End bp | 534008 |
Gene Length | 3561 bp |
Protein Length | 1186 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 643717689 |
Product | type II restriction-modification enzyme |
Protein accession | YP_002575143 |
Protein GI | 222823569 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTTTG ATTTAATACC ACTTCAAGAA TTCATCAAAA ATAATGTAAA AATACCAACT AAAGACATCA TAAAAGATTT TAAAGTCAAA ATAAATGAAT TTTTATCTCA AACTTCAAAA GCAAACGAGG AAGATTATCA AAAAAAAGAA ATATCAAATT TTTTAGAGAC AACATACAAC TACAAAACAA ACATAAAAGG CAATATAGAT TTAACTATAT ATGTAGATGA TATTGCAAAT GTTATATTTG AAATAAAATC CACTATAAAC AAAAAAGAAT TCCCACAATC AAACCAAGAT TTATCATCTA AAGCATTTTA TGAAAGTGTT TTGTATTTTT TAAGAGAGAG AAAAGGCAAT AAAAACAATT TTATAAAATT CATCATTATT TGCACTGCAA AAGATTTTTT TATCATAGAT GCAAGAGAAT ATGAAAAATT ATTTGAAAAT GATAAAACTA TTATCAGGCA TTATAAAAAT TGCGATGAAA AACAAGGCAC TAACACAAAA ACACAAGAAT TTTATGATCA GCTTTCATCT TATTTGAAAA CTCTTGATAA AAACTTAAAA TACACACATT TTGAACTAAG AGATGATTTA GACGAAACAA CGCTTAGTTA TATTTATCAA ATTCTCTCGC CGCAAGTTTT GTTAAAAGAA AAAATAACCC AAGATGCTAA CGCTTTAAAT GGAAATTTTT ATAAAGAATT ACTTTATATA CTAGGTTTAA AAGAAGAGGA AGATAAAAGC AAAAAAATCA TCTTATCAGA CACTCCAAAC ACACTAAGCC ATGCTATAAG ACAAACTTAT AAGGATATAG GCTTTGATGA TATTTTTGCT CTTTTAATTA CTTGGAATAA TAGAATTTTA TTTTTAAGAT TATTTGAGTC TATGCTTTTA TCTTTTAACC ACATAAAAAA ACCTTTCTTA ACAATAGAAA AAATTCCAAA TTTTGCAAAA TTATCCGAAC TTTTCTTTGA AGTTTTAGCC AAAAAAGAAA ACCAAAGAAG TATTAAAGAA TTTGATTTTA TACCTTATTT AAATTCGTCT TTATTTGACA AAAATACACA AGAACAACAG CACAAAGACA TAAAATTACT TGATTCTAAA CCACTTGAAA TTTTTCCAGA CTCTAAATTA TCACAAGAAT ACAAAAACTT AAAATCCTTA CCACTTTTAG AATATCTTTT TGCATTTTTA AGAACTTACG ATTTTACCAC CACAAGTAAA GACATACAAG ATAATCAAAA AATCAACCAC GATAAACTCA TAAATGCAAG TGTTTTGGGA AATGTTTTTG AAAAGCTAAA TGGCTACAAA GAAGGAAGCT ACTATACACC AAGTTTTATC ACTTCATACA TGTGCAAACA AAGTATAGAA AAAGTCGTGC TTGATAAATT CGAACAAGAG TATGCTTTAA AAGCAAGCTC GATAAGCGAT TTAAGAGCAT TAATCGATAG AAATTTCACT CTAGAAAAAC AAAAAGCCTA TCTTGATGCC ATACTAAGTA TAAAAATCTG CGATCCAGCT GTAGGAAGTG GGCATTTTCT AGTTTCAGCT TTAAATGAGC TTGTTTATAT TTTATATCAA CTAGGACTTA TAAAATCTTT ACTTAGAGAA AAGCTAATCC TAGAAAATGA TGAGCTTATC ATCTATACTA ATGATAAAGG AATTTTTAAT TACCAAAAAC CAAATTTTCA AAACGACCCT ATTCATCAAA TTCAAAAAGA GCTTTTTGAG TGCAAAAAAC TCATTATAGA AAATTGTCTT TTTGGGGTAG ATATCAACCC TAACTCATGT GAGATTACTA AACTAAGACT TTGGATAGAG CTTTTAAAAT ATAGCTTTTA TATCTTTGAA AATGACAAAA ACACAAATAC ACTTCAAATT TTACCAAACA TCGACATCAA CATAAAATGC GGGAATTCTT TAATAAGTAA AATACCTACA AACGAACCTT TGATGTTACA AACACAAGAA AGTGTAAAAT TATATAAGCA ATTAGAAGAT GATTATTATA ATGGTTTATA TACAAATAAA GAAGAACATT TAGAAAAAAT AAACAAAATC AAATCAAATT TTATAAAAGC ATACATTAAT ACAAAACACA CAAAAGAAAT AAAAGATTTT TATAAAAAAT GTGAAGAATA TGCAAAAAAT TACGAAGATT TTGGTTTAAA TACTCTACCT AAAGAATACG AAGAGTTAAA AATGCGCATA CAATGCCAAC TCATAAATTT ATCACTTTTT AATGTCGCAG ATATAGACAA AGAAAAAGCT CTAAAAGATT TAGAAGCCTT GAAAGAAAAA TATGATGAAA TTTTTTATGG TTTTGAATGG CGTGTGGAAT TTTCTAAAAT TTTATATTCT TCTTTAAGTA AAGAAGAAAT AACAAGCAAT AATTTATCCA AGCGAAAAGG AAATTTTAAA AATTTACATA AAGACAAGGA AGGAGAATTT CAAGGTTTTG ATTTGATTAT AGGCAACCCA CCATATATAA GTATTTTAGA CTTATCAAAA ATTGACAATT CTAAAATATA TAAAAAATTC TATCCTGAAA TTAAAGGTGC TTACGATATA TTTATTTTAT TTATAATAAA AGGATTAGAG CTTATCAAAA AAAATGGATG TTTTTGTTGG ATTATTCCTA ATAAATTTCT TATTTCTCAG TATGCTCAAA GCACTTATGA AATGTTACTT AAAAAGAAAT TTTTAGAAAA AAGCATTGAT GTTTCAAATT TAAATGTTTT TAAAAATGCT TCTGTTTATC CAATAATAAT ATTTGGGCAT AACGAAACAG AATTTACAAA ATTCATAGCT CTCGATCAAG ATGATTTAAA AACAAATAAT CTACAAATAG TTGATAGTGA AAATATATGG AATAAATTCA AAACTTTTAA AGAATGTGGA ATAAAAATAC AATCAGGACT TACTGGTTTT CAAGCACATT CTATAGTAGA ATATCTTAGC GAGAAAAAAA CAAAAAATAG CATGCGATTT ATTGTCAGTG GTTCCATTGA TAGATATAAA ATAGACAGTG ACAAAGTAAG ATATATGAAT AAAACATACA ATAACCCATA TATTAAAAAA AATAATGTAA TTTCCGAAGA TAAATGGAAT TTTTGGAATA GTGAAAAAAT AATTATTGCT GGGATGACAA AAAAACTAGA ATCTACTTAT TGCAAACATC CAATAGCCAT AGGTGTAGGT GTTTATGCTA TTTATGACTT TGCAAATGTT AATCCACTAG TGCTTTTAGG AATTTTAAAT AGCAAATTTA TGAATTATGT TTTTATAAAT ATGTTTAAGG ATAAACATCT TGCAGGCGAT TATTTATCAA TCAATAAAAA CAACTTAGAA TGTTTGCCTA TATTTGATAT AAATTCTAAA AATGAAAAAC TAGCAAACGA GCTTATAAGC TTAGTTGATG AGGTTTTAAA TTTAAAAGAA CAAGACAAAA ATACAAACAC CAAAACCCAA GAAGACAAAA TAAACTCTAT CGTTTATAAA CTTTACAACC TAAGCAAAGA AGAAATAAAA ATCATTGAAG GCAAACAATG A
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Protein sequence | MRFDLIPLQE FIKNNVKIPT KDIIKDFKVK INEFLSQTSK ANEEDYQKKE ISNFLETTYN YKTNIKGNID LTIYVDDIAN VIFEIKSTIN KKEFPQSNQD LSSKAFYESV LYFLRERKGN KNNFIKFIII CTAKDFFIID AREYEKLFEN DKTIIRHYKN CDEKQGTNTK TQEFYDQLSS YLKTLDKNLK YTHFELRDDL DETTLSYIYQ ILSPQVLLKE KITQDANALN GNFYKELLYI LGLKEEEDKS KKIILSDTPN TLSHAIRQTY KDIGFDDIFA LLITWNNRIL FLRLFESMLL SFNHIKKPFL TIEKIPNFAK LSELFFEVLA KKENQRSIKE FDFIPYLNSS LFDKNTQEQQ HKDIKLLDSK PLEIFPDSKL SQEYKNLKSL PLLEYLFAFL RTYDFTTTSK DIQDNQKINH DKLINASVLG NVFEKLNGYK EGSYYTPSFI TSYMCKQSIE KVVLDKFEQE YALKASSISD LRALIDRNFT LEKQKAYLDA ILSIKICDPA VGSGHFLVSA LNELVYILYQ LGLIKSLLRE KLILENDELI IYTNDKGIFN YQKPNFQNDP IHQIQKELFE CKKLIIENCL FGVDINPNSC EITKLRLWIE LLKYSFYIFE NDKNTNTLQI LPNIDINIKC GNSLISKIPT NEPLMLQTQE SVKLYKQLED DYYNGLYTNK EEHLEKINKI KSNFIKAYIN TKHTKEIKDF YKKCEEYAKN YEDFGLNTLP KEYEELKMRI QCQLINLSLF NVADIDKEKA LKDLEALKEK YDEIFYGFEW RVEFSKILYS SLSKEEITSN NLSKRKGNFK NLHKDKEGEF QGFDLIIGNP PYISILDLSK IDNSKIYKKF YPEIKGAYDI FILFIIKGLE LIKKNGCFCW IIPNKFLISQ YAQSTYEMLL KKKFLEKSID VSNLNVFKNA SVYPIIIFGH NETEFTKFIA LDQDDLKTNN LQIVDSENIW NKFKTFKECG IKIQSGLTGF QAHSIVEYLS EKKTKNSMRF IVSGSIDRYK IDSDKVRYMN KTYNNPYIKK NNVISEDKWN FWNSEKIIIA GMTKKLESTY CKHPIAIGVG VYAIYDFANV NPLVLLGILN SKFMNYVFIN MFKDKHLAGD YLSINKNNLE CLPIFDINSK NEKLANELIS LVDEVLNLKE QDKNTNTKTQ EDKINSIVYK LYNLSKEEIK IIEGKQ
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