| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0542 |
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| Symbol | pyrF |
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| ID | 7411102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | + |
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| Start bp | 515860 |
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| End bp | 516543 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 643717673 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_002575127 |
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| Protein GI | 222823553 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 63 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACTTT GCGTGGCTTT TGATGTGGCA AGCTATGATG AGTGTATAAA TTTAGCCAAA
GAATTAAAAG GTTTAGATCT TTGGGTTAAA ATAGGGCTTA GATCGTATTT AAGAGATGGA
GTAAAGCTTT TAGAAGCGAT TAAAAAAGTG GATAATTTTA AAATCTTTTT AGATTTAAAG
CTTTATGATA TACCAAATAC TATGGCAGAT GCTTGTGAAG AACTTGCTAA GCTTGATGTA
AATATGTTTA ATATCCATGC AAGTGCAGGT AAAAGTGCTA TGTGTATGAT TATGGAGCGC
TTAAATGCTT TAAGTAAAAG ACCTTTGGTG CTTGCTGTAT CTGCTTTAAC TAGCTTTGAT
GAGCAAGAAT TTTTTAGTGT ATATAAACAA GATATTAAAC AAGCTGTTAA GGATTTTTCT
AAAATTAGTT ATGAAAGCGG TCTTGATGGT ATGGTTTGTT CAGTATATGA AAGCTTACTG
ATTAAAGAAA ATACAAGTGC AAATTTTATT ACATTAACGC CTGGAATCCG TCCGTTTAAA
GAAAATTCAG ATGATCAAAA AAGAGTAGCT GATATACAGT GTGCTAAGGA TAATTTGTCA
GATTTTATCG TGGTTGGAAG ACCTATTTAT AAAGCAAAAG AACCTAGAAG GATTTGCGAG
AATATATTAG AGCATTTAAA ATAA
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| Protein sequence | MKLCVAFDVA SYDECINLAK ELKGLDLWVK IGLRSYLRDG VKLLEAIKKV DNFKIFLDLK
LYDIPNTMAD ACEELAKLDV NMFNIHASAG KSAMCMIMER LNALSKRPLV LAVSALTSFD
EQEFFSVYKQ DIKQAVKDFS KISYESGLDG MVCSVYESLL IKENTSANFI TLTPGIRPFK
ENSDDQKRVA DIQCAKDNLS DFIVVGRPIY KAKEPRRICE NILEHLK
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