| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0494 |
|---|
| Symbol | racR |
|---|
| ID | 7411054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | + |
|---|
| Start bp | 469497 |
|---|
| End bp | 470168 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 643717625 |
|---|
| Product | two-component response regulator |
|---|
| Protein accession | YP_002575093 |
|---|
| Protein GI | 222823519 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAATG TTTTAATGAT CGAAGATGAT CCAGATTTTG CAGAGTTTTT GGCAGAATAT
TTGGCCCAGT TTAATATAAA AGTTACTAAT TATGAAGATC CATATTTGGG AATGAGTGCT
GGTATAAAAA ACTATGATTG TTTAATTCTT GATTTAACTT TACCTGGACT TGATGGTCTT
GAAGTTTGTC GTGAAATAAG AGAAAAATAT AGTATTCCTA TTATTATTTC TTCAGCTAGA
AGTGATTTGA GTGATAAAAT TGTAGGGCTT CAAATAGGCG CAGATGATTA CTTACCAAAG
CCATATGATC CAAAAGAAAT GCATGCAAGA ATCATGAGTT TGATTCGTCG TTCTAAACGA
ACCAATGAAA CTCCTGAAAA AATAATCAAT TCGGCATTTA AAATTGATGA AAAAAGACAT
GAGATAAGTT ATAATGATGA GGTTTTGGTT TTAACTCCTG CTGAGTATGA AATTTTAAGC
TATATGATAA GACAACATGG TTTTTCAGTT AGCAGAGAAC AACTTGTATA TCATTGCAAA
AGCTTAAAGG ATAAAGATTC TAAAAGCTTA GATGTTATTA TTGGCAGACT TAGAACTAAA
ATTGGTGATA GCTCAAAAGC ACCAAAACAT ATTTTTTCAG TTAGAGGAAT AGGGTATAAA
TTAATAGGAT GA
|
|---|
| Protein sequence | MINVLMIEDD PDFAEFLAEY LAQFNIKVTN YEDPYLGMSA GIKNYDCLIL DLTLPGLDGL
EVCREIREKY SIPIIISSAR SDLSDKIVGL QIGADDYLPK PYDPKEMHAR IMSLIRRSKR
TNETPEKIIN SAFKIDEKRH EISYNDEVLV LTPAEYEILS YMIRQHGFSV SREQLVYHCK
SLKDKDSKSL DVIIGRLRTK IGDSSKAPKH IFSVRGIGYK LIG
|
|---|
| |