Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0424 |
Symbol | fumC |
ID | 7411161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | - |
Start bp | 396239 |
End bp | 397630 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 643717555 |
Product | fumarate hydratase |
Protein accession | YP_002575033 |
Protein GI | 222823459 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATATA GAATCGAACA CGATACTATG GGAGAGATTA AAGTTCCTAA TGATAAATAT TGGGGTGCAC AAACTGAAAG AAGTTTTGAA AATTTTAAAA TTGGTTGTGA AAAAATGCCA AAAGTTTTAA TTTATGCTTT TGCAAATCTT AAAAAATCTT TGGCTTTAGT TAATAATAAA CTTGGCAAAT TAGACGATGC TAAAAAAAAT GCTATTGTGC AAGCTTGCGA TGAAATTGTA GCAGGAAAAT TTGATGATAA CTTCCCACTA GCAATATGGC AAACAGGTTC AGGCACACAA AGCAATATGA ATATGAATGA AGTTATAGCA AATCGCGCTA CTGAAATTAT GGGTGGAGAT TTTAGAAAAG AAAAACTTGT TCATCCAAAT GATCATGTAA ATATGAGCCA AAGCTCAAAT GATACTTTTC CAACTGCCAT GAGCATAGTT TCAGTAGAAC AAGTAGAAAA AAAACTTATC CCTGCTTTAG ATGAGCTTAT TGCAACTTTT GAAAAAAAAG TAAAAGAATT TGAAGGGATT ATTAAAATAG GAAGAACTCA TCTTCAAGAT GCTACACCAC TTACTCTAGC TCAAGAATTT AGTGGATATT TATCTATGTT GCTTCATTCA AAAGAGCAAA TCATCGCTTC TTTACCTACT TTAAGAGAGC TTGCAATAGG TGGAACAGCT GTTGGTACAG GATTAAATGC TCATCCAGAA CTTAGTGAAA AAGTAAGCGA AGAATTAAGC AAGCTAATAG GTACTAAATT TGTGTCAAGC CCAAATAAAT TCCATGCACT AACAAGCCAT GATGCAATTA ATTTTACCCA TGGAGCTATG AAAGGCTTGG CTGCGAATTT AATGAAAATA GCAAATGATA TTAGATGGCT AGCAAGTGGC CCTAGATGTG GTCTTGGAGA GTTAAACATA CCTGAGAATG AACCAGGGAG TTCTATCATG CCAGGTAAGG TTAATCCTAC TCAGTGTGAA GCCTTAACTA TGGTTGCAGT GCAAGTTATG GGAAATGATG CAGCTATTGG TTTTGCAGCA AGCCAAGGAA ATTTCGAGCT TAATGTTTTT AAACCTGTAA TTATTTATAA TTTCTTGCAA AGCCTTGATT TACTAGCTGA TGCTATGCAT TCATTTAATA TCCACTGTGC TGTTGGTATA GAGCCAAATA AAGAAAAAAT AGATCATAAT TTACATAATT CTTTAATGCT AGTAACTGCA TTAAATCCAC ACATTGGTTA TGAAAATGCA GCTAAAGTAG CAAAAAATGC CCATAAAAAA GGCATTTCTT TAAAAGAAAG CGCTATGGAA CTTGGCTTAG TAAGCGAGGA AGACTTTGCT AAATTTGTAG ATCCTACAAA AATGATAGGG CCAAAAAAAT AA
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Protein sequence | MEYRIEHDTM GEIKVPNDKY WGAQTERSFE NFKIGCEKMP KVLIYAFANL KKSLALVNNK LGKLDDAKKN AIVQACDEIV AGKFDDNFPL AIWQTGSGTQ SNMNMNEVIA NRATEIMGGD FRKEKLVHPN DHVNMSQSSN DTFPTAMSIV SVEQVEKKLI PALDELIATF EKKVKEFEGI IKIGRTHLQD ATPLTLAQEF SGYLSMLLHS KEQIIASLPT LRELAIGGTA VGTGLNAHPE LSEKVSEELS KLIGTKFVSS PNKFHALTSH DAINFTHGAM KGLAANLMKI ANDIRWLASG PRCGLGELNI PENEPGSSIM PGKVNPTQCE ALTMVAVQVM GNDAAIGFAA SQGNFELNVF KPVIIYNFLQ SLDLLADAMH SFNIHCAVGI EPNKEKIDHN LHNSLMLVTA LNPHIGYENA AKVAKNAHKK GISLKESAME LGLVSEEDFA KFVDPTKMIG PKK
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