| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0420 |
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| Symbol | |
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| ID | 7411157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | + |
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| Start bp | 391448 |
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| End bp | 393823 |
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| Gene Length | 2376 bp |
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| Protein Length | 791 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 643717551 |
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| Product | TPR-domain containing protein |
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| Protein accession | YP_002575029 |
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| Protein GI | 222823455 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATAATC TAATCACTGA GTTGTCAGAT TTAGCCAAAG AATATTTCGA AAATTCAGAA
TTTGAAAAAT GCGATGAGGT TTTAAGTGAA CTTATAGCTT TTTGCAAAGG TGAAGTTACG
CTTGCTCAAG ATGGTAAAAT GATTTTCATA GATGATGGAG ATAAGCATCG TTTGCTTTTA
GAAGCTTACC ATAATAGAGC GCTTTGTAGA TTTAATTGTT TAAAATTTCA AGAAGCACTT
AAAGATGCAA CTATAGCTGT AGAATTTGAT CCTAACAATG TATTTTTGTT TAATCTTTTG
GGTCTATGTA ATTTTAAATT AGATTTATTA CAAGAAGCAC TTTTGGCTTT TAATAAAACT
ATAGCACTAG ATAATGCATA TTATTTAGCA TATTTTAATA GGGCTAGAGT TTATATACTT
TTAGATGAGC ACACAAAGGC TTTAAAAGAT TTACAAACTT GTATTGATTT GGCTCCAGAA
TATTATATGG CTTATTATAC TAGAGCCATT ACTTTGCTTA GTGTTGATCC AAAACAAGCT
TTGATTGATT TTAAAAAATC TCAAGATTTA GGATTTGAAT CCTCGCAGAT TTTTTATTAT
CAAGGTGTTG CTTGTGAGAA TTTGGAAGAT TATCAAAAAG CTATAGAATT TTTTACTAAG
ATGATTGAGC AAGATGAGAG TTTTGCTGAT GCATATTATA AAAGGGCTAA TAATAAACGT
AAAGTTGATG ATTTAGAAGG AGCTTTGCAA GATTGTTTAA AATCCATTGA ACTAGACAAT
GAAAATGCAA TGGCATATTT GATTTTGGGA CATATTTATA AAGATTTAGA AAAGATAGAA
TTATCAATAG ATGCTTTTAA AAAATCAATC AATTTAGATG AAAATTTACA ATATCCATGT
TTTGCATTAG CTAGAGTTTT GTATGATTTA AAAGATTATG AACAAGCTTT GAAGTATTAT
GATAAAACAA TTGAGCTTTA TGAAGAATAT GCCCAAGCTT ACATTAATAG AGGTAATACT
AAAATCAATC TAAAAATGAT TGAAGAGGCT ATAGAGGATT TTGATTTAGC AGCTAAATAT
TATCAAGAAA GAGCAAGAAG GCATGATTTT ACTCCATCAG AATTAGCAGA GCTTGAACAC
GCAGTTCCTT ATGGTTTTTA TCATTTGGGT AATAGCTTGT ATGAGATAGA CAAATATGAT
GAAGCTTTGA TAAGTTATGA AAAAGCCTTG AAATATCAAA AAGAATATCC TGATGTGTTT
TTTAATAGGG CTTATTTAAA ATCTGATCTT GAAAAATATG ATGAAGCTTT AGAAGATAGC
GAATTAGCTG TTAAATATTA TAAAAAGCAA AATAATACTC AAGATTATGT TAATTCATTT
TCTCAAAGAG CTTGGATTAA AAGCAAGCTT GAAAGATTTC AAGAAGCTAT GGATGAATAC
AATGAGCTTA TAAAAATATA TAAAGATTAT ATTGATTTAA AAGATGTATT ATTTGAAAGA
GCATATTGCG CAAAAGAGCT TGAATCTTAT GAAGAATTAA TAGCTTATTG CAATGCAGCA
CTCAAGGTGG ATAAAAATAA TCTTAAACTT TATTTTTGGC GAGGAATTGC TAAATATAAT
TTAAGTTTAG AAGAAGAGGC CATAGAAGAT TTAAATAGGG CTTTAAAAAT TGATAAAAAC
CATAATGGAG TAAGGTATTA TAAGGGACTT TGTTATGAAG ATCTTTGTAT GTTTGAAGAA
GCTATAAAAT GTTATGATAG TGTGATTTTA AGTAATGAAG AAGATGATGA ATCATATTTT
CATAGAGCAA AATGTAAAAG AAATCTTGAA AAATACAATG AAGCCTTAAA AGATATCAAT
GAATGCTTAA AAATAATTGA TGATATTGGG GAATATTGGA TAGAAAAAGC ACAAATTTTA
AGCTTTTTAG GAAAATATGA TGAAAGTTTT GAAGCAGCAA AAAAAGCAAG CGAACTTGAG
CCAAAATCAT ATAAATGTTA TCATTTTATG GGTGCAGTTA AGGTGTATTC GCAAGATTTT
AAAGAAGCTA TAAAATATCT TAATATGGCT TTAAATTTAG ACGAAAGTCA AAATTGGACA
CATTATTATA AGGCAGAGTG TTTAAGAAAT TTAGGTGATT TTCATGAAGC ATTGCAATGT
TATGAAGACT GCTTAAAGAT AACAAAAGAA AATACTGATG CTTTGGTGGG AAAAATTCAG
TGTTTAGAAG AGCTAAAAGA ATACAAGCAA GCTTTAGAAT GCACTAAAGA ATTATTAAAA
TTTGATGAAG AAAATGAGTT TGCATTAAAA AGTCAAAATA TTTTAATGCA AAAATTAAAA
CAGCAAAATA AAAAGTGGTG GCAAATTTGG AATTAA
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| Protein sequence | MDNLITELSD LAKEYFENSE FEKCDEVLSE LIAFCKGEVT LAQDGKMIFI DDGDKHRLLL
EAYHNRALCR FNCLKFQEAL KDATIAVEFD PNNVFLFNLL GLCNFKLDLL QEALLAFNKT
IALDNAYYLA YFNRARVYIL LDEHTKALKD LQTCIDLAPE YYMAYYTRAI TLLSVDPKQA
LIDFKKSQDL GFESSQIFYY QGVACENLED YQKAIEFFTK MIEQDESFAD AYYKRANNKR
KVDDLEGALQ DCLKSIELDN ENAMAYLILG HIYKDLEKIE LSIDAFKKSI NLDENLQYPC
FALARVLYDL KDYEQALKYY DKTIELYEEY AQAYINRGNT KINLKMIEEA IEDFDLAAKY
YQERARRHDF TPSELAELEH AVPYGFYHLG NSLYEIDKYD EALISYEKAL KYQKEYPDVF
FNRAYLKSDL EKYDEALEDS ELAVKYYKKQ NNTQDYVNSF SQRAWIKSKL ERFQEAMDEY
NELIKIYKDY IDLKDVLFER AYCAKELESY EELIAYCNAA LKVDKNNLKL YFWRGIAKYN
LSLEEEAIED LNRALKIDKN HNGVRYYKGL CYEDLCMFEE AIKCYDSVIL SNEEDDESYF
HRAKCKRNLE KYNEALKDIN ECLKIIDDIG EYWIEKAQIL SFLGKYDESF EAAKKASELE
PKSYKCYHFM GAVKVYSQDF KEAIKYLNMA LNLDESQNWT HYYKAECLRN LGDFHEALQC
YEDCLKITKE NTDALVGKIQ CLEELKEYKQ ALECTKELLK FDEENEFALK SQNILMQKLK
QQNKKWWQIW N
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