| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0411 |
|---|
| Symbol | |
|---|
| ID | 7411148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | - |
|---|
| Start bp | 383889 |
|---|
| End bp | 384599 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 25% |
|---|
| IMG OID | 643717542 |
|---|
| Product | conserved hypothetical integral membrane protein (DUF540 domain protein) |
|---|
| Protein accession | YP_002575020 |
|---|
| Protein GI | 222823446 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATAC TATACCTAAG CTTGCAGGAT TTTCTTAGCA GGCCTTTTTT AAAATTCTCA
ACTTTGCCTT TTTTAATCAG CTTGGTTATT TTTGCCCTGC TAGTATATTA TAGTTATGAT
ATATTTTTTT CTTATATTGA AGATGTGGTT AGTGGCTCTT TTATGGCTTG GTTTTTTAGC
TTTTCTATAG TGCAATTTTC ACTTGCATTT TTAAGTGCTA TAGGTGGATT TTTTATAGTA
GTATTTGCCT CTGTATTTTT TACTATGTTT ATAATTTCTT TTTTAACTCC TTATATAGTT
AAAAAAATCA ACCAAAAATA CTACAACCAT TCTATACAAA AAGAAGTAAA TTCTTTAGAA
ATTTTACTTA AAACATTCAA ATTTTTACTC ATCTCATGCG TATTATTTGC AGTAGCCACT
TTCTTATTGA TTATACCTTT TGTTAGCATT GTGATTTATT ATGGAGTATT TTATTATTTA
TTTCATAAAC TTTTATTGCT AGATGTATTA AGTAATGTCT TAGATAAAAA CAATTTTGAT
GATTTTTATA AAAATTCATC ACCGTTATAT TTTAAAATTA TCACTTTAGT CTTTTTTACT
TTATCAAGCA TACCTTTGCT TGGTTTATTT TTACAAGTGT TTTATGTGAT TTTCTTAACA
CACTTAAGTT ATCAAAAAAT TTTAAAGCTT AAAGCCAATA ACAATGGATG A
|
|---|
| Protein sequence | MNILYLSLQD FLSRPFLKFS TLPFLISLVI FALLVYYSYD IFFSYIEDVV SGSFMAWFFS
FSIVQFSLAF LSAIGGFFIV VFASVFFTMF IISFLTPYIV KKINQKYYNH SIQKEVNSLE
ILLKTFKFLL ISCVLFAVAT FLLIIPFVSI VIYYGVFYYL FHKLLLLDVL SNVLDKNNFD
DFYKNSSPLY FKIITLVFFT LSSIPLLGLF LQVFYVIFLT HLSYQKILKL KANNNG
|
|---|
| |