| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0392 |
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| Symbol | ctsE |
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| ID | 7410300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | + |
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| Start bp | 369267 |
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| End bp | 370781 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 643717523 |
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| Product | putative type II protein secretion system E protein CtsE |
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| Protein accession | YP_002575001 |
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| Protein GI | 222823427 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATGACG CAAAAGTAAT AAAAGTTTTA AATAAACTTC CTTTGCAAGA ATTGGCTTTA
GAATATAAAT TAGAAATTTT AGACTTAAAC CAAACTCTTA AAATAGAAAA ATATCTCCAT
GTTTTGCCTT TTTCTCTAAT AGAACAATAT AATATTTTTT GTTTTTATGA AGATGATGAA
AATATTCATA TAGCTTCTTT AAAACCTTTA GATGAGAGTA TTTTAGAAAA AATACAAAAT
TTATACCGCT TAAAGACGAT TAAAATTTTT CTTTGTGATT TTATACAATT TAAATTCTTA
CTAGAAAGGA TTAAATTTTT AATTTGCTTT CAAAACTATC TTGATAAATT AAAACTTAAT
TTAAAAAGTG ATGAAAATAA AGATGAGCTT TTATTAGAGC AGTTTTTGAA TTTAATTTTA
ACTTATGCTT GCTTTTTAAG AGCAAGTGAT ATTCATTTAG AGCCTTTGGA AAATGAAGTT
TTGATAAGAT TTAGAATAGA TGGAGAATTA AAATATATCC ATAGCCTTGA TGTGAGTTCT
TATCAGGCTT TATTAATGCA TATAAAAATC ATCACCCTAC TTAATGTAGC CGAACAAAGA
CAAGCTCAAG ATGGAAGTTT TTCCAAGATT ATCTTAGAGC AAAAGTATGA TTTTAGAATT
TCAATTATGC CTTTATTATT TGGGCAAAGT GTGGTACTTA GGATTTTAAA ACAAGATGAG
CATGTTTTAA AACTTGATAG ACTTTTTATT AAAGAAGAAA ATTTAATCCG TTTAAAAAAA
GATATGAATG CACCTTATGG TTTGATTTTA TTTTGTGGGC CAACAGGGAG TGGTAAAAGT
ACTTTTATGC ATGCTATTTT AAACGAGCTT GATCAAAATA AAAAAATCAT TACTCTAGAA
GATCCTATAG AATACAAACT TAAACATGCT CAGCAAATTT TGTTAAATTC TAAAACCGGT
TTTGATTTTC ACAAAGCTTT AAGAGCGGTT TTGAGGCAAG ATCCTGATGT GATTATGGTG
GGTGAAATCA GAGATGAGGA GAGTTTGGAT ATAGTTTTAA AAGCTTCTTT AAGTGGACAT
TTAGTTTTAA GCACCCTGCA TACTAATGGT GCTATAGAAG CTATTTTTAG AATGAAGCAC
ATGGGTGCAA AAGAATATTT AATAGCTTAT GCACTTAATT TGATTATAGC TCAACGCTTG
GTAAGAAAAT TATGCGAATG TAAAGAAGCT AGCGATGAAA AATTTCATTT TCAAAATCAA
GTTTTTGAAG GAAAATTTTA TAAAGCAAAG GGTTGTGCTA AGTGTATGTA TAGTGGATAT
AAAGGGCGTT TAATGGTGGC TGAGTTTTTA TTTTTGGACC GTAATTTAAA AAGTATGATA
GAAAATAATG CAAATTATGA AAATATTTTA ACATATGCTT TAAAAAAAGG CTTTTTGACT
TTAGGTATGG ATGCTTTGGA AAAAGTTAAG CTTGGTTTAA CAAGCATAGA TGAGCTAAGA
AAGATTGGTT TTTGA
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| Protein sequence | MNDAKVIKVL NKLPLQELAL EYKLEILDLN QTLKIEKYLH VLPFSLIEQY NIFCFYEDDE
NIHIASLKPL DESILEKIQN LYRLKTIKIF LCDFIQFKFL LERIKFLICF QNYLDKLKLN
LKSDENKDEL LLEQFLNLIL TYACFLRASD IHLEPLENEV LIRFRIDGEL KYIHSLDVSS
YQALLMHIKI ITLLNVAEQR QAQDGSFSKI ILEQKYDFRI SIMPLLFGQS VVLRILKQDE
HVLKLDRLFI KEENLIRLKK DMNAPYGLIL FCGPTGSGKS TFMHAILNEL DQNKKIITLE
DPIEYKLKHA QQILLNSKTG FDFHKALRAV LRQDPDVIMV GEIRDEESLD IVLKASLSGH
LVLSTLHTNG AIEAIFRMKH MGAKEYLIAY ALNLIIAQRL VRKLCECKEA SDEKFHFQNQ
VFEGKFYKAK GCAKCMYSGY KGRLMVAEFL FLDRNLKSMI ENNANYENIL TYALKKGFLT
LGMDALEKVK LGLTSIDELR KIGF
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