| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0358 |
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| Symbol | fdhA |
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| ID | 7410266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | + |
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| Start bp | 330854 |
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| End bp | 333676 |
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| Gene Length | 2823 bp |
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| Protein Length | 940 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 643717489 |
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| Product | formate dehydrogenase, alpha subunit (selenocysteine-containing) |
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| Protein accession | YP_002574968 |
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| Protein GI | 222823394 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.721212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTAG CAAGAAGAAA TTTTCTTAAG CTTGCTGGTA TTGCTGGTCT TGGAAGCGCG
GCTTTTGGTA GTGAAAACAA AGCCATTAGA GCTGCAAGCG AACAAGAAGT AGCAAATCCT
TATCCAGATT CTAAGATTGT TAGAACAATC TGTAGTATCT GTAGTGCAGG CTGTGGAATT
AAAGCAGAAG TGCAAGATGG AGTTTGGGTG CGTCAAGAAA ACGCTATAGA ACATCCTATT
TCTCAAGGAT CACACTGCTG TAAAGGGATA GATCAAATCG ATCTTACTAA ATCAAAACAG
CGTATTAAAT ATCCTATGAA AAAAGAAAAC GGCAAATGGG TGCGTTTAAC TTGGGAGCAA
GCTATCAATG AAATTGGTGA TAAAATGCTT GAAATCCGTA AAGAAAATGG ACCTGATAGC
GTTATGTTCT TAGGTTCTGC TAAATTTAAT AACCAACAAG CTTATTATTT TAGAAAATTT
GCAGCATTTT GGGGTACTAA CAATATAGAC CACGTTGCTA GAATTTGACA CAGCGCAACA
GTCGCCGGTG TGGCGAATAC ATGGGGTTAT GGCGCTATGA CAAATCATTT TGGTGATGTG
ACTAAACATT CAAAAATGAT GATTATTTTT GGTGCAAATA CTGCTGTGGC AAATCCTATC
GGATTTAAAC ACTTATTACA AGCAAAAGAT CGTAATAATG CTAAATTAGT AGTTGTAGAT
CCTGTATTTA CAAAAACTGC AGTACATGCT GATGAATATG TAAGAATTCG TCCAGGAACT
GATATAGCTT TAGTTTATGG TATGCTTCAT TTGATCTTCA AAAACGGTTG GGAAGATAAA
GAAATCATCA AAACTAGAAC TTATGGGGTT GAAGAAATAA AAGCAGAGGC TGCTAAATGG
ACTCCTGAGG TTGTAGAAGA TGTAACAGGT GTTCCAGCAG CTCAACTTGA AAAAATCACA
AGAATGCTAG CTACAATCAA ACCTGCTACG CTATTTTGGG CTTTAGGTAT TACTCAACAC
TCAGTAGGTA GTTCTAATAC AAGAATTTTA GCTATCTTGC AACTTGTATT AGGAAATATA
GGCAAACCAG GCGCAGGAAC AAATATCATC AGAGGTCATG ATAATGTTCA AGGAGCTACT
GATATGGGTT GTTTGGCTGA TACTTTACCG GCTTATTATG GGCTTGATGA TAACGCATGG
AATCATTTTG CTAATTTTTG GAATGTAGAT AGAGAGTATT TAAATTCAAG ATTTTATTCT
AAAGAATGGA TGCATGAAAA AGGTTTTTCG CTAGCAAAAT GGTGGCAAGG CGTTTTACAT
GAAGAAAAAA CTTACTCTAA CTCACCTATC CGCGTACTTT GGGTGCAAGG AACAGGTATT
ACTTCTATGG CACATACGGT TAAAATTCAA GAAGCACTTA AAAAGCTTGA TATGATAGTA
ATTGCTGAAC CTTTTGTAAA TGAAGTAGCA GTTTTGGCTG ATCGTCCAGA TGGAATTTAT
ATCATTCCTG CTTGTACTCA ATTTGAAACA GAAGGTTATG TAACAGCGAC AAATCGTGCT
ATGCAGTGGC GTTCTCAAGT AGTAAAACCA ATTTATGAAA GTAAAGAAGA TCAAGAGATT
ATGTTTGCTT TTGCTAAAAA ATTTGGTTTT TATAAAGAAT ATACTCGTGG CATGAAAATG
GAATTAAAAG ATCACAAACT TGTGCAAACA AGAGATGATA ATGATGATAA TTTCATATGG
CCTGATGATG CTACAAGAGA AATGAGTAAT GGTCTTTTGA GTATAGGTTT AAGAGGTATT
TCAGCTGAGC GTCTAAGAAA ACACCAGCAA AATTGGGAGC ATTTTGATCC TGATACCCAA
AGAGGTTTAG GTGGTGAAGT TAAAGGTGAA TATTACGGAT TGCCTTGGCC TTGCTGGGAT
AAACAACACC CAGGTACTTC TATCATGTGG AATACTGATA TTCCTTATGA AGAAGGTGGT
ATGGGCTTTA GAAACCGCTT TGGTTTAGAG CATGATGGAC ATTCTCAATT AGCAGATGAG
GCCTTTACTC CAAAAGGATG TAAAGTTAAA GGTGGCTACC CACAAATCAC TAAAGAAAAT
ATCGAAAAAG TGTTTAATAT CAAACTAAGT GATAAAGAAA AAGAATTAAT GGGTGCTAGC
TGGAGTACAG ATATTTCAGG TATTATCTTA GAAAAATGCA GAGAAAAAAG TGCTTGTTGT
TTGGGTAATG CAAGAGCTAG AATGAAAGTT TGGGAGTTTG CTGATCCTAT TCCACTACAT
AGAGAGCCTA TTCACTCGCC TCGTTGGGAT TTGGTTAAAA AATATCCTAC TTGGGGCGAT
CAAGAGAAAA ACTTTAGAGT TGAGAGTAAA TTTATTAGTG AGCAGCAAAA AACAGATTGG
AGTAAAGAGT TTCCAACTAT CATTTCAAGT ATGCGCTTAG TAAATTTAAG TGGAGCTGGT
ATGCTTGAGA GAACTAGTAA ATATCTTGCT GCAATCACAC CTGAAATGTT TGCAAATGTG
CACCCAGAAC TTGCTTTAAA ATATGGCATC AATGATGGTG ATATGATGTG GATTCACTCA
CCACAAGGCA CTAAGATTAA AGTAAAATGT GTGCATAATC ATTCAGTTAC ACCAGATAGA
ATTTGCTTGC CTTATAACTT TGCAGGTATT ATGCAAGGTG TGGATTTAAG CTATAATTAT
CCTGAAGGCA CTAAACCTTA TACTATAGGG GAAAGTTCTA ACACGGTTAC TAACTATGGT
TTTGATATAA ATACGCAAAT TTCTGAGTTT AACGCAGGAC TTTGCAGACT TGAAAAGGCT
TAA
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| Protein sequence | MALARRNFLK LAGIAGLGSA AFGSENKAIR AASEQEVANP YPDSKIVRTI CSICSAGCGI
KAEVQDGVWV RQENAIEHPI SQGSHCCKGI DQIDLTKSKQ RIKYPMKKEN GKWVRLTWEQ
AINEIGDKML EIRKENGPDS VMFLGSAKFN NQQAYYFRKF AAFWGTNNID HVARIUHSAT
VAGVANTWGY GAMTNHFGDV TKHSKMMIIF GANTAVANPI GFKHLLQAKD RNNAKLVVVD
PVFTKTAVHA DEYVRIRPGT DIALVYGMLH LIFKNGWEDK EIIKTRTYGV EEIKAEAAKW
TPEVVEDVTG VPAAQLEKIT RMLATIKPAT LFWALGITQH SVGSSNTRIL AILQLVLGNI
GKPGAGTNII RGHDNVQGAT DMGCLADTLP AYYGLDDNAW NHFANFWNVD REYLNSRFYS
KEWMHEKGFS LAKWWQGVLH EEKTYSNSPI RVLWVQGTGI TSMAHTVKIQ EALKKLDMIV
IAEPFVNEVA VLADRPDGIY IIPACTQFET EGYVTATNRA MQWRSQVVKP IYESKEDQEI
MFAFAKKFGF YKEYTRGMKM ELKDHKLVQT RDDNDDNFIW PDDATREMSN GLLSIGLRGI
SAERLRKHQQ NWEHFDPDTQ RGLGGEVKGE YYGLPWPCWD KQHPGTSIMW NTDIPYEEGG
MGFRNRFGLE HDGHSQLADE AFTPKGCKVK GGYPQITKEN IEKVFNIKLS DKEKELMGAS
WSTDISGIIL EKCREKSACC LGNARARMKV WEFADPIPLH REPIHSPRWD LVKKYPTWGD
QEKNFRVESK FISEQQKTDW SKEFPTIISS MRLVNLSGAG MLERTSKYLA AITPEMFANV
HPELALKYGI NDGDMMWIHS PQGTKIKVKC VHNHSVTPDR ICLPYNFAGI MQGVDLSYNY
PEGTKPYTIG ESSNTVTNYG FDINTQISEF NAGLCRLEKA
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