| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0354 |
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| Symbol | nspC |
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| ID | 7410262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | + |
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| Start bp | 327484 |
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| End bp | 328647 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 643717485 |
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| Product | carboxynorspermidine decarboxylase |
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| Protein accession | YP_002574964 |
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| Protein GI | 222823390 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01047] carboxynorspermidine decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 0.434135 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAATTA AAAATTATTT AGATAATGAT TTTACAACAC CAGCTTATGT AGTAGAAGAA
AATAAACTTA GAAAAAATTG CGAGCTTTTA GCAAAAGTGA GCGAGCAAAG CGAAGCCAAA
ATTTTACTTG CCTTAAAGGG TTTTGCTTTT TCAGGTGCTA TGGATATAGT GGGTGAGTAT
TTATCAGGTT GTACTTGTAG TGGGCTTTGG GAAGCAAAAT ATGCAAAAGA ATACATGGAT
AAAGAAATTC ATACTTTCTC ACCTGCTTTT AAAGAGGATG AAATAGATGA AATTATCAAG
CTTTCAAATC ATTTAGTATT TAATTCTTTT AATCAATTTA AAAAATACAA AGAAAAAGCA
AAGATTAAAA GCATTGGATT GCGTGTAAAT CCTGAATTTT CAGTAGCTCC AAAAGAAATT
TATAATCCTT GTGGCAGGTT TTCAAGACTT GGAATTCGTG CTGTTGATTT TGAAAATGAA
GATATAAGCG ATGTTAATGG GCTTCATTTT CATGCTTTGT GTGAAGAAAG TGCGCATTCT
TTAGAACTTG TTTTAAATGC TTTTGAAGCT AAATTTGCAA AATTTATTAA AAATATGAAA
TGGGTAAATT TTGGTGGTGG TCATCATATC ACAAAAGAAG GTTATGACAC GCAAAAACTG
ATTGATCTTT GTAAAAAATT TGCTGATAAA TACGGAGTTC AAGTATATCT TGAGCCAGGT
GAGGCTGTGG GTTGGCAATG TGGAACTTTG GTAGCTAGCG TGGTTGATAT AATAGAAAAT
GAGAAAAAAA TAGCTATTTT GGATACTTCA AGTGAAGCTC ATATGCCAGA TACTATCATC
ATGCCTTATA CAAGTGAAGT TTTAAATGCA AGAATTTTAG CAAGTCGTGA TGGGCAAAAT
TATAGCGAAC TAAAAGAAAA TGAATTTGCT TATTTGCTTG GTGGAAATAC TTGTTTAGCA
GGCGATATAA TGGGTGAGTA TGCTTTTAAT CAAGAGTTAA AAATAGGGCA AAAAATAGTA
TTTTTAGATC AAGCGCATTA TTCTATAGTA AAAAATACTA CTTTTAATGG AGTAAAACTT
CCAAATTTAA TGTTCTTAGA TAAAAATGGA AATTTATCTA TGGTAAGAGA ATTTAGCTAT
GAAAATTATT CAAAAAGAAA CTAA
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| Protein sequence | MQIKNYLDND FTTPAYVVEE NKLRKNCELL AKVSEQSEAK ILLALKGFAF SGAMDIVGEY
LSGCTCSGLW EAKYAKEYMD KEIHTFSPAF KEDEIDEIIK LSNHLVFNSF NQFKKYKEKA
KIKSIGLRVN PEFSVAPKEI YNPCGRFSRL GIRAVDFENE DISDVNGLHF HALCEESAHS
LELVLNAFEA KFAKFIKNMK WVNFGGGHHI TKEGYDTQKL IDLCKKFADK YGVQVYLEPG
EAVGWQCGTL VASVVDIIEN EKKIAILDTS SEAHMPDTII MPYTSEVLNA RILASRDGQN
YSELKENEFA YLLGGNTCLA GDIMGEYAFN QELKIGQKIV FLDQAHYSIV KNTTFNGVKL
PNLMFLDKNG NLSMVREFSY ENYSKRN
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