Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0299 |
Symbol | |
ID | 7410207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 271555 |
End bp | 273402 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 643717433 |
Product | capsular polysaccharide biosynthesis protein, putative glycosyltransferase |
Protein accession | YP_002574912 |
Protein GI | 222823338 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0255655 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAACC CAAATAGTGC TATAGATAGG ATAAAAAATT CACTTTCTTA TAAATTAGGT CTTGCTATCA TAGAATGTAA AAAACAACAT GGGCGGGGGA GGTATATAAC CCTACCATAT AAATTATATA AGATAAAACA ACAACATTTT AAAGAACAAA AACTATACAA GCAAACTATT AAAATATTTC CACAACTTGC ATATCCTAAA GTAGAATCTT GCAAAGATTA TAATGAAAGC ATAAGATATA AGTATCATCT TTCCTATATG CTAGGAGAAG CTTTGATTTG TGCTCATAAA GCTTGGTATA AAGGAGGATA CTTTATGTTA CCTTCTTTGT TAAAAGAAAA ATATAAGATA TATAAAAACA TTCAAGATAT TATCAGCATA TTGCCTCAAA AATTACACTA TCGTTTTTAC AATTCAATAA TAAAAAATCA TAAAATAAAT ATTCAAGATT TGGTTGATGT TTTGAAACAA CATAAAGATT ATAAACCTAT ACTAGAAAAT ATATTTCATA ATTTTGATTT TTTTGTAAAA CATTTTGATC TTATTAGAAT TTGGCTATCT TCGAAAGATT TTAAAGAAAA ATATAAACAA GAAAATCACC CTTACCCTTC TTTGCTTGAT CCTAAAAAAC TAAACGATGA AAATGAAAAA ATTAACTATA AAAATATTCC TGCTGAGCTT GCATGGGAAA TGAATTTACC TTTACCGGAT AATTATAAGT TTGTGTATCC TTTATTTGGT TTGTCTGGAG GAGGCGCCTT AACTTCTTTT TTTAATAAAT GTGGCTTTAG CATGAATTAT GATTTTCATA GAGATTTTGA AAAAAGCTAT GTCGTAAATT ATAATTCTTT TTTAAAAAGA AATCAAAATA TACTTTATTA TACAGAGTAT GGCTTAAATG TTAAAAATAG AAACAAATTT TTATCGCTAT TGTGTCAAAA TAATATTGTT TTTTTGGTTA GGGATCCTAT ATCTAGATTG AAGACGGGTG TGAATCATCA CACAAACAAC CCTAAAAGTG ACTTGAGAAC ATTTGATTTG GGAAGTGATT ATAATAAAAT CTTAAAATGT AAAACTTATG GAACGGGAGA TATTAATAAT CACTATGCTA GAAAGCCAAA AATCGATTAT TTAAAATTGT GGTTATCAAA CGATAGGTGG TTTTTATATT TATCATTTTT AGAGTCTTTA AGGCTGGTGA AATTAAATAT CACCTACATT GACATGGAGG AAATTAAACC AGAAAAAGCA TTTGATACAA TGTGTGTTTT GGCAAATAAA TTTGGATTTA GCAAGCCTAC TGATGAAAGT TTTTTTAAGG GTGTGATGAA TGGAGATTTG CTAGGTGTTA TACCTTTTAC ACTTTGTGTG TATTCGATTG ATTTAAATGG TAGTTATGCA ATAGGTAAAA ACAACAGTAT CCATCTTCAA ATAACATCTA CAAATTTAAT TGAATTCTAT GGGAAATCCA AAGAATATAT CAACATTGTA AGTGATTTTT TTGATAAACC TTTAAAATAT GACAATTTGG GTATTTTTAT AAAACCACAA GACTATGAGC GGTTAAGGCA GAGCAGTGAG CTGATGCAAG CCACAAAAAA ATATCTGGTA AATTTTATAA AGGCATTGGA AGAAAGAATA GAGATTGAAA AATCTAAATT ATTTAAAGAA GATGATGTGT TAAAATATCT AAAAGAAAAC AAAGAGCTAA GGATTAGACT GAAAGAATTA CTTGATAAAG AACTTGCTCA CATTAAGCAG TACAGGCCAG ATATAGTTGC TTCTTGGAAA TACTATCAAG AATTTGAAAA AATGTGCAAA GAATTAGATG GTAATTAA
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Protein sequence | MFNPNSAIDR IKNSLSYKLG LAIIECKKQH GRGRYITLPY KLYKIKQQHF KEQKLYKQTI KIFPQLAYPK VESCKDYNES IRYKYHLSYM LGEALICAHK AWYKGGYFML PSLLKEKYKI YKNIQDIISI LPQKLHYRFY NSIIKNHKIN IQDLVDVLKQ HKDYKPILEN IFHNFDFFVK HFDLIRIWLS SKDFKEKYKQ ENHPYPSLLD PKKLNDENEK INYKNIPAEL AWEMNLPLPD NYKFVYPLFG LSGGGALTSF FNKCGFSMNY DFHRDFEKSY VVNYNSFLKR NQNILYYTEY GLNVKNRNKF LSLLCQNNIV FLVRDPISRL KTGVNHHTNN PKSDLRTFDL GSDYNKILKC KTYGTGDINN HYARKPKIDY LKLWLSNDRW FLYLSFLESL RLVKLNITYI DMEEIKPEKA FDTMCVLANK FGFSKPTDES FFKGVMNGDL LGVIPFTLCV YSIDLNGSYA IGKNNSIHLQ ITSTNLIEFY GKSKEYINIV SDFFDKPLKY DNLGIFIKPQ DYERLRQSSE LMQATKKYLV NFIKALEERI EIEKSKLFKE DDVLKYLKEN KELRIRLKEL LDKELAHIKQ YRPDIVASWK YYQEFEKMCK ELDGN
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