Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0294 |
Symbol | kpsF |
ID | 7410202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 263136 |
End bp | 264092 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643717428 |
Product | arabinose-5-phosphate isomerase |
Protein accession | YP_002574907 |
Protein GI | 222823333 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation |
TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCAAA TAGATGCGAT TAAAATAGCC AAAGAAGTTT TCGAAATTGA ATCAAAAACG ATTTTAGATT TATGCGACAC CTTAAATGAG GAATTTAGTA AAGCGGTTGA GTTGATTTTG TCTATTAAAG GCAGGTGTGT TGTAAGTGGT ATGGGTAAGT CAGGTCATGT AGGAGCCAAG ATAGCTGCAA CTTTAGCTAG TACAGGCACT CCGAGTTTTT TTATGCATCC GGGTGAAGCA TTGCATGGCG ATCTTGGAAT GATCGCGAGT GAAGATGTTC TTTTGGCTAT TTCAAATTCA GGAGAAACTG AAGAGGTTTT AAAACTTATA CCAGTGATCA AAAAAAGAAA AATTCCTTTG ATTGTCATGG CGGGAGATCA AAACTCTACC TTAGCAAAAC AGGCTGATGT TTTTATCAAT ATCGCGGTAA AAAAAGAAGC ATGTCCGCTT CAACTTGCTC CAACTTCATC TACCACCGCT ACTTTGGCAA TGGGCGATGC CATAGCAGTG GCTTTAATGA AAGCAAGGAA TTTTAAACCC GATGATTTTG CGTTATTTCA CCCAGGAGGA AGCTTAGGTA GAAAGCTTTT AACCAAAGTG GGTGATTTGA TGGTATCAAG CAACCTACCT ATAGTCAGCC CTAATAGTGA ATTTAATGAA TTAGTTGATG TGATGACTAG TGGTAAATTG GGACTTTGTA TAGTTGTTGA AAATGAAAAA TTAGTTGGGA TTATCACAGA TGGAGATTTA AGAAGAGCAT TAAGAGCAAA TGATAAGCCA AGATTTGACT TTAAAGCTAA AGAAATCATG AGCGAGAGTC CAAAAACCAT AGAAGCAAGT GCCATGGCAA GTGAAGCAGA AGAGTTGATG CTAAAACATA AGATTAAAGA AATTGTTGTT ACACAAAATG AAAAAATAGC AGGTATTATA CAACTTTATG CGATAGGAAA TGTGTGA
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Protein sequence | MSQIDAIKIA KEVFEIESKT ILDLCDTLNE EFSKAVELIL SIKGRCVVSG MGKSGHVGAK IAATLASTGT PSFFMHPGEA LHGDLGMIAS EDVLLAISNS GETEEVLKLI PVIKKRKIPL IVMAGDQNST LAKQADVFIN IAVKKEACPL QLAPTSSTTA TLAMGDAIAV ALMKARNFKP DDFALFHPGG SLGRKLLTKV GDLMVSSNLP IVSPNSEFNE LVDVMTSGKL GLCIVVENEK LVGIITDGDL RRALRANDKP RFDFKAKEIM SESPKTIEAS AMASEAEELM LKHKIKEIVV TQNEKIAGII QLYAIGNV
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