| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0266 |
|---|
| Symbol | murD |
|---|
| ID | 7410175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | - |
|---|
| Start bp | 235878 |
|---|
| End bp | 237077 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 643717401 |
|---|
| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
|---|
| Protein accession | YP_002574880 |
|---|
| Protein GI | 222823307 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
|---|
| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTT CACTTTTTGG ATATGGCAAA ACAACCAAAG CTTTTGCGCA GCGTTTTGGC
AAATGTGATA TTTATGATGA TCATTTTACA AGTATAAGTA AGGATGAATT TGACAATACC
CTCTTACCAC CTTGTGAATT TGATCCTTTA AAAAGTGATT TAGAAATTCC AAGCCCTGGT
TTTCCAAGTG ATCATTCTCT CATACAGCAA GCAAGAAATT TAAGTAGCGA GTATGATTTT
TTTTACGATG GTATGCCAAA AAGTGTTTGG ATAAGCGGAA CTAATGGCAA AACCACCACC
ACTCAAATGA CACATCATCT TTTAAAACGC ATCAACGCAC AAATGGGAGC AAATATAGGA
ATTCCTTTAG CACAAATGGA TATTAGTGCT AAATTATGGA TTTTAGAAAG CTCATCTTTT
TCACTTTTTT ACACTAAAAT AGCTAAACCT GAAATTTATG CGCTTTTACC TATCACGCCT
GATCATCTTT CTTGGCATAA AAGCTTTGAA AATTATGAGC AAGCAAAGCT TAGTGTACTT
GAAAGAATGA ATGAAAATGA TGTGGTAATT TTACCTAAAA AATACGAAAA TTATCCAACT
CATGCTTATG TTATAAGCTA TGAAGATGAG CAAGATTTAG CTAAAAAAAT GCAAATTGAT
ATAGAAAAAA TTCATTTCAA AACCCCATTT TTACTTGATG CGCTTATTGC CTTAAGTATA
GAAAAAATCA TACTAGATCG TTGCTCTTAT GAGCTTTTAA ATGAGTTTAA GATAGAAAAA
AATAAACTTG AAGAAATATT TGATCATAAA AATAGACTTT GGGTAAATGA TACTAAAGCA
ACTAATCTTG ATGCTAGCTT AGCTGCTCTT AAACGCTATA AGGATAAAAA AATTCATCTT
ATTATAGGTG GGGATGATAA AGGAGTGAAT TTAAGTGCTT TATTTGCCTT TATGAAAGAG
CTTAATATAG AGCTTTATGC CATAGGAAAA AGCACTAATA AAATGCTTGA ATATGCTAAA
AATGCTAATT TAAAAGCACA TTTTTGCGAG TTTTTACCTA AAGCGGTAGA AAAAATCAAT
CAAAACTTAA CTAATAATGA AGTAGCCCTG CTAAGCCCTG CTTGTGCGAG TTTGGATCAG
TTTAAATCTT ATGAAGAAAG AGGGGAGCTT TTTAAAAAAT GTATTCAAGA GTTAAACTAA
|
|---|
| Protein sequence | MKISLFGYGK TTKAFAQRFG KCDIYDDHFT SISKDEFDNT LLPPCEFDPL KSDLEIPSPG
FPSDHSLIQQ ARNLSSEYDF FYDGMPKSVW ISGTNGKTTT TQMTHHLLKR INAQMGANIG
IPLAQMDISA KLWILESSSF SLFYTKIAKP EIYALLPITP DHLSWHKSFE NYEQAKLSVL
ERMNENDVVI LPKKYENYPT HAYVISYEDE QDLAKKMQID IEKIHFKTPF LLDALIALSI
EKIILDRCSY ELLNEFKIEK NKLEEIFDHK NRLWVNDTKA TNLDASLAAL KRYKDKKIHL
IIGGDDKGVN LSALFAFMKE LNIELYAIGK STNKMLEYAK NANLKAHFCE FLPKAVEKIN
QNLTNNEVAL LSPACASLDQ FKSYEERGEL FKKCIQELN
|
|---|
| |