Gene Cla_0259 details

Gene Information

• Locus tag: Cla_0259
• Symbol: prfB
• ID: 7410168
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: +
• Start bp: 230145
• End bp: 231245
• Gene Length: 1101 bp
• Protein Length: 366 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 643717394
• Product: peptide chain release factor 2
• Protein accession: YP_002574873
• Protein GI: 222823300
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1186] Protein chain release factor B
• TIGRFAM ID: [TIGR00020] peptide chain release factor 2

Plasmid Coverage information

• Num covering plasmid clones: 44
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATAATT ACGAATACAG CGAACTTTTA AAAAAATTAA AAAATAAAGT TGGAAATATT 
GCTTCTATCA TAAAGCCTGA AGAAATAAAA GCAAGATTAA AAGAAATAGA AAATTTAGAA 
AATTCCCCTT CTTTTTGGAG TGATGTAAAA CAAGCAGGTA TTATAGGAAA AGAAAAAACT 
AAAATTTCAA ATTTATTAAA AAACTACGAG AACGCTTTCA ACGCTTTAAA TGATGCTAGC 
GAGCTTTTTG ATCTAGCAAA TAGTGAAAAT GATTTAGACA CTATACAAGC TTTATTTGAT 
GATGCACCAA ATTTAGAAGA TCTTATAGTA AGTCTTGAAA TTTCTATGCT TTTAAGCGGG 
GAAAATGATG GTAAAAATGC TATAGTTTCA ATTCACCCTG GAGCGGGTGG GACTGAGAGT 
AATGATTGGG CTAGTATGCT TTATAGGATG TATTTGAGAT TTTGCGAAAG AGAAGGCTTT 
AAGGTAGAAA CGCTTGATTT TCAAGAAGGC GAAGAAGCAG GATTAAAAGA TGTGAGCTTT 
TTAGTAAAAG GTGAAAATGC TTATGGGTAT TTAAAAGCTG AAAATGGAAT TCACCGCCTT 
GTTAGAACTT CTCCTTTTGA TAGTGCTGGG CGTCGTCATA CTAGCTTTTC AAGTGTTATG 
GTATCACCAG AATTAGATGA TGATATAGAA ATAGAAATTG AAGATAAAGA TATAAGAATT 
GATTATTATA GAGCTAGTGG GGCTGGTGGG CAGCATGTTA ATAAAACAGA ATCAGCAGTG 
CGTATAACTC ACATGCCAAG TGGTATAGTA GTACAATGTC AAAATGATAG AAGCCAACAC 
AAAAATAAAG CCACAGCTTT TAAAATGCTA AAATCACGCC TTTATGAACT TGAGCTCATG 
AAGCAACAAG ATGAAGCAAA TTCAAGTGAA AAAAGTGAGA TAGGCTGGGG TCATCAAATA 
AGATCTTATG TGCTTTTTCC TTATCAACAA GTCAAAGATA CACGCTCAAA TGAAGCATTT 
TCTCAAGTTG ATAATATCTT AGATGGAGAT ATTAAAAAAA TGATAGAAGG TGTTTTAATA 
GCGCAAAAAG CACAAGATTA G 

 

Protein sequence

MDNYEYSELL KKLKNKVGNI ASIIKPEEIK ARLKEIENLE NSPSFWSDVK QAGIIGKEKT 
KISNLLKNYE NAFNALNDAS ELFDLANSEN DLDTIQALFD DAPNLEDLIV SLEISMLLSG 
ENDGKNAIVS IHPGAGGTES NDWASMLYRM YLRFCEREGF KVETLDFQEG EEAGLKDVSF 
LVKGENAYGY LKAENGIHRL VRTSPFDSAG RRHTSFSSVM VSPELDDDIE IEIEDKDIRI 
DYYRASGAGG QHVNKTESAV RITHMPSGIV VQCQNDRSQH KNKATAFKML KSRLYELELM 
KQQDEANSSE KSEIGWGHQI RSYVLFPYQQ VKDTRSNEAF SQVDNILDGD IKKMIEGVLI 
AQKAQD