Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0236 |
Symbol | fliA |
ID | 7410959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 208913 |
End bp | 209599 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 643717371 |
Product | flagellar biosynthesis sigma factor |
Protein accession | YP_002574850 |
Protein GI | 222823277 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 56 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCCGC ATAATGCATA TGCATCTGCT TTAAAAAAAG AGCAAGATGA TTTAGTCATT TCATATATGC CAGCTTTAAG GGCTATGGCA TTTAGACTAA AAGAGCGTTT GCCAGCTAGT ATTGATGTTA ATGATTTAAT TAGCATTGGT GTTGAAGAGA TGATTAAACT CTCGCGCCGT TATGATAAAG AACAAAATGA TAATTTTTGG GGTTTTGCAA GAAAAAGAGT AAATGGGGCT ATGCTTGATT ATCTAAGAAG CCTTGATGTA ATGAGTAGAA GCAATAGAAA AATTATCAAA GATATCGATG TTATAGTTGA TGAGTATTAT CAAGAAAATG AAAAAGAGCC AGATGATGAG TATTTGGCAC AAAAGCTAAA TTTAGAAGTA GAAAAAGTAA AAGAAGCAAG AGCAGCTCAT GCAATCTCGC TTGTGATGCC TTTAGATGAA CAGCTAAATT GCTTTAATGA TAGCAATATA ATAGAACAAA TTGAAAAAGA AGAATTGATA GAAAAAATCA ATGCGGTTTT AGAAGAATTT AAAGAAAGAG AAAAATTAGT TATACAGCTT TATTATTACG AGGAATTAAA TTTAAAAGAA ATCGCAGAGA TTTTAGAGAT AAGCGAGTCA AGAATTTCAC AAATTCACAA ACGCTTATTA AAGAAAATTC GTGAGAGGTT AGCTTAG
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Protein sequence | MQPHNAYASA LKKEQDDLVI SYMPALRAMA FRLKERLPAS IDVNDLISIG VEEMIKLSRR YDKEQNDNFW GFARKRVNGA MLDYLRSLDV MSRSNRKIIK DIDVIVDEYY QENEKEPDDE YLAQKLNLEV EKVKEARAAH AISLVMPLDE QLNCFNDSNI IEQIEKEELI EKINAVLEEF KEREKLVIQL YYYEELNLKE IAEILEISES RISQIHKRLL KKIRERLA
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