| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0201 |
|---|
| Symbol | pal |
|---|
| ID | 7410924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | + |
|---|
| Start bp | 179675 |
|---|
| End bp | 180160 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 643717336 |
|---|
| Product | peptidoglycan-associated lipoprotein precursor |
|---|
| Protein accession | YP_002574815 |
|---|
| Protein GI | 222823242 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0000039239 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TCATTTTTGC TTCAATTACT GCATTTGCTG TTATTGTAAG TGGTTGTGCT
ACTAAAAACA CTAGTGTTAG TAGTTCAAGT AGTGTAGATG GCTCAAAAGG TAGTGGTGGA
TCTGATAGAT TTGAAAATCT TGAATCTTTA AATTCTGTAG CAAATGTATA TTTTGATTTT
GATAAATTTA ATGTTAGATC AGATATGCAA AAAGTTATTG CAAATAATGC TGAAATCTTT
AATAAAGAAG CTGCTAATGC TGCAATAGTA GTTGAAGGAA ACTGCGATGA GTGGGGAACT
GATGAGTATA ATCAAGCTTT AGGTCTAAAA AGAGCTAAAG CGGTAAAAGA ATCTTTAGTA
GCTCAAGGTG TTAGCGCAGA TAGAATTAGC GTTAAAAGCT ATGGAGAAAC TAATCCTGTA
TGTACTGAAA GAACAAAAGC TTGCGATGCT CAAAATCGCC GTGCAGAATT TAAATTATCA
AAATAA
|
|---|
| Protein sequence | MKKIIFASIT AFAVIVSGCA TKNTSVSSSS SVDGSKGSGG SDRFENLESL NSVANVYFDF
DKFNVRSDMQ KVIANNAEIF NKEAANAAIV VEGNCDEWGT DEYNQALGLK RAKAVKESLV
AQGVSADRIS VKSYGETNPV CTERTKACDA QNRRAEFKLS K
|
|---|
| |