Gene Cla_0200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_0200 
SymboltolB 
ID7410923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp178407 
End bp179606 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content27% 
IMG OID643717335 
Producttranslocation protein TolB 
Protein accessionYP_002574814 
Protein GI222823241 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0823] Periplasmic component of the Tol biopolymer transport system 
TIGRFAM ID[TIGR02800] tol-pal system beta propeller repeat protein TolB 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000000701864 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TACTAGTATT TTTATTTTTT TGTTCAGTAT TATTTGGACA AGATGCAACA 
ATATCTGTTG TTAATAAAGG TATGCAATTG CCAAAAATTT ACATTAAAGA TCAGTCTAAA
TTGAATGATT TAGATCTTAA AAAAAGTTTT TATAATATGC TTGTTAATGA TATAAAAGTA
AGTTCAAATT TCGAGATAAC TCATGATGAA AAACAAGGTG ATTATATTTT TTCTTATATA
TTAAATAAAA ATGGTAAGCT TTTAGATATT GATGTTGAAA TTTTAGCTGC AAATGAAACT
AAAACAAGAT TTTATGAACA AATTCTTTCT ATCGAAGAGT ATCCATTTTT AGCGCATAGA
AGTGTTGCTC AAATGAATAA AAAATTAGGT TTTGCTCCGG TTGATTGGAT GGATCATAAA
ATTTTAATAG CTAGAACTCA AGGTAGTAAG CAAAGTGATA TTTTATTAGC AGATTATACT
TTAACTTACC AAAAAGTATT GATTTCAAAA GGCTTAAATT TGTTTCCTAA ATGGGCAAAT
AAAGAGCAAA ATGCTTTTTA TTTTACTGCC TATGAAGATG AGATTCCAAC TCTTTATAAA
TATAATATGA AAAATAAAAA TATAACAAAA ATTATTGCTA GCAAAGGTAT GATGGTTGCT
TCTGATGTGA GTGATGATGG TAAAAAAATT TTACTTACCA TGGCTCCAAA AGACCAACCT
GATGTATATT TGTATGATGT AGACTCAAAA AATCTGACAC AAATTACAAA CTATATGGGT
ATTGATGTAA ATGGCAATTT TGTTGATGGT GATAAAAAAA TTGTATTTGT GTCTGATCGT
TTAGGTTATC CAAATATTTT TATGCAAAAT TTAGATTCAA ATTTAACAGA ACAAGTTGTT
TTTCATGGTA AAAATAATTC TTCGGTTTCT ACTTATAAAC ACTATATGGT TTATTCTAGT
AGAGAAATAA ATCAAAGCGG AGTTTTTAAT CTTTATTTGA TGTCAACCCA AAGTGATTAC
ATAAGACAAC TCACTGCAAA TGGTAAAAAT CTTTTTCCAA GATTTTCAAG TGATGGAGAA
AGTGTTGTGT TTATTAAGTA CTTAGGCTCT CAAAGTGCTT TAGGTGTTAT TCGAATTAAT
GCAAATAAAG CTTTTCATTA TGGCTTAAAA GTGGGCAAAA TTCAATCAAT TGATTGGTAA
 
Protein sequence
MKKILVFLFF CSVLFGQDAT ISVVNKGMQL PKIYIKDQSK LNDLDLKKSF YNMLVNDIKV 
SSNFEITHDE KQGDYIFSYI LNKNGKLLDI DVEILAANET KTRFYEQILS IEEYPFLAHR
SVAQMNKKLG FAPVDWMDHK ILIARTQGSK QSDILLADYT LTYQKVLISK GLNLFPKWAN
KEQNAFYFTA YEDEIPTLYK YNMKNKNITK IIASKGMMVA SDVSDDGKKI LLTMAPKDQP
DVYLYDVDSK NLTQITNYMG IDVNGNFVDG DKKIVFVSDR LGYPNIFMQN LDSNLTEQVV
FHGKNNSSVS TYKHYMVYSS REINQSGVFN LYLMSTQSDY IRQLTANGKN LFPRFSSDGE
SVVFIKYLGS QSALGVIRIN ANKAFHYGLK VGKIQSIDW