| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0200 |
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| Symbol | tolB |
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| ID | 7410923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | + |
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| Start bp | 178407 |
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| End bp | 179606 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 643717335 |
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| Product | translocation protein TolB |
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| Protein accession | YP_002574814 |
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| Protein GI | 222823241 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.000000701864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TACTAGTATT TTTATTTTTT TGTTCAGTAT TATTTGGACA AGATGCAACA
ATATCTGTTG TTAATAAAGG TATGCAATTG CCAAAAATTT ACATTAAAGA TCAGTCTAAA
TTGAATGATT TAGATCTTAA AAAAAGTTTT TATAATATGC TTGTTAATGA TATAAAAGTA
AGTTCAAATT TCGAGATAAC TCATGATGAA AAACAAGGTG ATTATATTTT TTCTTATATA
TTAAATAAAA ATGGTAAGCT TTTAGATATT GATGTTGAAA TTTTAGCTGC AAATGAAACT
AAAACAAGAT TTTATGAACA AATTCTTTCT ATCGAAGAGT ATCCATTTTT AGCGCATAGA
AGTGTTGCTC AAATGAATAA AAAATTAGGT TTTGCTCCGG TTGATTGGAT GGATCATAAA
ATTTTAATAG CTAGAACTCA AGGTAGTAAG CAAAGTGATA TTTTATTAGC AGATTATACT
TTAACTTACC AAAAAGTATT GATTTCAAAA GGCTTAAATT TGTTTCCTAA ATGGGCAAAT
AAAGAGCAAA ATGCTTTTTA TTTTACTGCC TATGAAGATG AGATTCCAAC TCTTTATAAA
TATAATATGA AAAATAAAAA TATAACAAAA ATTATTGCTA GCAAAGGTAT GATGGTTGCT
TCTGATGTGA GTGATGATGG TAAAAAAATT TTACTTACCA TGGCTCCAAA AGACCAACCT
GATGTATATT TGTATGATGT AGACTCAAAA AATCTGACAC AAATTACAAA CTATATGGGT
ATTGATGTAA ATGGCAATTT TGTTGATGGT GATAAAAAAA TTGTATTTGT GTCTGATCGT
TTAGGTTATC CAAATATTTT TATGCAAAAT TTAGATTCAA ATTTAACAGA ACAAGTTGTT
TTTCATGGTA AAAATAATTC TTCGGTTTCT ACTTATAAAC ACTATATGGT TTATTCTAGT
AGAGAAATAA ATCAAAGCGG AGTTTTTAAT CTTTATTTGA TGTCAACCCA AAGTGATTAC
ATAAGACAAC TCACTGCAAA TGGTAAAAAT CTTTTTCCAA GATTTTCAAG TGATGGAGAA
AGTGTTGTGT TTATTAAGTA CTTAGGCTCT CAAAGTGCTT TAGGTGTTAT TCGAATTAAT
GCAAATAAAG CTTTTCATTA TGGCTTAAAA GTGGGCAAAA TTCAATCAAT TGATTGGTAA
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| Protein sequence | MKKILVFLFF CSVLFGQDAT ISVVNKGMQL PKIYIKDQSK LNDLDLKKSF YNMLVNDIKV
SSNFEITHDE KQGDYIFSYI LNKNGKLLDI DVEILAANET KTRFYEQILS IEEYPFLAHR
SVAQMNKKLG FAPVDWMDHK ILIARTQGSK QSDILLADYT LTYQKVLISK GLNLFPKWAN
KEQNAFYFTA YEDEIPTLYK YNMKNKNITK IIASKGMMVA SDVSDDGKKI LLTMAPKDQP
DVYLYDVDSK NLTQITNYMG IDVNGNFVDG DKKIVFVSDR LGYPNIFMQN LDSNLTEQVV
FHGKNNSSVS TYKHYMVYSS REINQSGVFN LYLMSTQSDY IRQLTANGKN LFPRFSSDGE
SVVFIKYLGS QSALGVIRIN ANKAFHYGLK VGKIQSIDW
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