Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0168 |
Symbol | maf6 |
ID | 7410891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | - |
Start bp | 151821 |
End bp | 153737 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | 11 |
GC content | 23% |
IMG OID | 643717303 |
Product | motility accessory factor |
Protein accession | YP_002574782 |
Protein GI | 222823209 |
COG category | [S] Function unknown |
COG ID | [COG2604] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0000847186 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGATAAAA AGTTATTTAA TAAAAATCTT AATTCTTTAA AAAATGAAAA TTTAAAAAAT AAATTAAAAA ATCTAAAAGT AAATAAATTT AGAGTTAGCA TTGGCTCTGA TCCTTTAGAT ATAAATTTTA TAAGTAATGA TAAAATCACA AAAAGCAAGC TTTATGAACA TTCTTTAGTA CAATTAAATG AAAAATTAAA TTTATATAAT GATAAATATT TTCTATACCC TGTATTTTAT TTTTTTGGTT TTGGAAATGG AATTTTATAT AAAGCTCTTT TGCAAAATAA AAATCATCAA AAAATTGTTG TTTTTGAATG TGAGCTTGAA TTTATTTATT TAAGTTTTCA TTTTGTTGAT TTTAGCAAAG AATTAAATGA TGATGCTTTA ATTATATTAG ATATAAAAGA GTTAAATGAA CTTGATTTTC AAATTTTATG TAGCAACGAT CCTTTTTTTC ATTTTTTAAG AGTATATTTT TTAGATATTC ATTGTGATTA TTATGAAAAA TATCATGATG AAATTTTAAA CACTAATGAA AATATGCAAA AACATATAAA GCAAATTATT TTGTTGCATG GCAACGATTC AAAAGACGCT TTAATAGGTA TAGAAAATCA TCTTTATAAT TTATATGATT TAATCTCAAA TTTTAGCCTT AGCAAGTTAA TTACAAAAAG AGAAAAAGCA TGTAAAAATG CCATTATAGT CTCCACTGGC CCTTCATTAA CCAAACAACT TCCATTATTA AAACAATATG CAAACCATGC TAGTATATTT TGTGCTGATG GCTCATATCC TATATTAGCC AAAGAAGGAA TCAAGCCTGA TTATGTTTTT TCTTTAGAAA GAATAGAAAA AACGAGTGAA TTTTTTAATA ATGATTTTGG AAAATTTGAT AAAGATATTT TATTTATACT AATGAGCGTA ACGCATCCAA ATACTATAAA ATATTTAAAA CAAAATAATA GAAAATTTAT AATCACCCAA AGATTATTAC CTTTTGTAAA ATTTCTTAAC TTAAATTCTA ATGGTTATAT AAGCGGTTGT CCAAGTGTAG CAAATATGGC TTATTTTATA GCGGTTCTTC TTAAACATGA AAATATAATT TTTATAGGAC AAGATCTTGC TTATGCTAAA GATGGTAGTT CCCATCCTAA AGATTATCAT TATTCTAGTA CTTGTGATAC ATACCGTAGA ACTCATATAA ATACTTTAGC ATATGGTGGA AAAGAGCAAA TTAAAACCCA TGAAGTATGG AATGTTTTTA GAGTGGAATT AGAAAAAAAA ATTACTTTTG TAAGAGATAA TTTTAACATT ACTACTTATA ATGCAACAGA AGGTGGAGCT AGGATAGAAG GAACTATAGA AAAGCCTTTT AAAGAACTTT GCGAAGAATT ATTAGCAAAA GAAGCTTTAA AGAATTTTGC CAAACTTAAC GAAACAAGCA AAGAAAAAAA GATAGAATTA TTATTAAAAT CTTTTTATAA ACTATACCAA GCTAGTAAAA TTTGTGAAAA TTTAATTTTA AAATCCTCAT CTTTAATCAA TAAAATACAT TTTTTAATTA ACGATGAAAA TAATTTTTCT AAAATAATAC AAGAAATTGA TATTTTTAAA AACCATATAG AAAAAATTAA ACTAATTGAA GAATTAACGC TTCCTTTATT TGTACAATTT GAATTAAATC TAGCAAAAAT CTATGTATTA CATCCAAAAA CCCAAGAAGA TGCTTATAAT AAAAAATTAT TATGGATAAA AGAGCACTTA GAATGGTTTG TGCTTATAGA AAATCATATT AAAATTTTAA AAGAAGTTAT AGAAAAAAGC TTTTTAAAAT TTGAAAATAT TTTAGTAGAA AAAAATATGC AAAAATATAT TCATAAAATT CAAAATAAAA AATTATATCA AGATTAA
|
Protein sequence | MDKKLFNKNL NSLKNENLKN KLKNLKVNKF RVSIGSDPLD INFISNDKIT KSKLYEHSLV QLNEKLNLYN DKYFLYPVFY FFGFGNGILY KALLQNKNHQ KIVVFECELE FIYLSFHFVD FSKELNDDAL IILDIKELNE LDFQILCSND PFFHFLRVYF LDIHCDYYEK YHDEILNTNE NMQKHIKQII LLHGNDSKDA LIGIENHLYN LYDLISNFSL SKLITKREKA CKNAIIVSTG PSLTKQLPLL KQYANHASIF CADGSYPILA KEGIKPDYVF SLERIEKTSE FFNNDFGKFD KDILFILMSV THPNTIKYLK QNNRKFIITQ RLLPFVKFLN LNSNGYISGC PSVANMAYFI AVLLKHENII FIGQDLAYAK DGSSHPKDYH YSSTCDTYRR THINTLAYGG KEQIKTHEVW NVFRVELEKK ITFVRDNFNI TTYNATEGGA RIEGTIEKPF KELCEELLAK EALKNFAKLN ETSKEKKIEL LLKSFYKLYQ ASKICENLIL KSSSLINKIH FLINDENNFS KIIQEIDIFK NHIEKIKLIE ELTLPLFVQF ELNLAKIYVL HPKTQEDAYN KKLLWIKEHL EWFVLIENHI KILKEVIEKS FLKFENILVE KNMQKYIHKI QNKKLYQD
|
| |