Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0167 |
Symbol | maf5 |
ID | 7410890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | - |
Start bp | 150068 |
End bp | 151804 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 643717302 |
Product | motility accessory factor |
Protein accession | YP_002574781 |
Protein GI | 222823208 |
COG category | [S] Function unknown |
COG ID | [COG2604] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0000316837 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAAAG AATTATTTTT AAAAAACACC CAAGCCTTAT TTGAAGTAGA TCAAATTTTA GCTTATGAGC TTAGGAAAAT AAACCAAATT TTAAATTTTA AATTTATGCA AGATAAAATT TATAGCTTAC AGCACCAAAT TTATATCATG CAAAATAATA ATTTTGATAA TAATAAATTT GAATTATATC CTGTATTGTT TTTTTATGGT TTTGGAGATG GATTATTTTA TAAAAATTTA TTAAAAAATC CCAATTTAAA ACATATCATA ATCTTTGAAG AAGAATTAGA AATTTTATAT CTAGCTTTTC ATTTAAGTGA TTTTTCCGAT CTTATAAAAA ATGAAAAAAT TATTTTATTT TTTACTCCAA ATATTAACAC AGCCCAATTA AAAGTTTTAT TTAATTATCA ACACATCAAA TACAGCGCTA AAATATTTAA TTTTCATTTT TATGATGAAT TTTATGCAAA TTTTTATATG GAAAAAGCAA ATGCTTTAGT TCAAAATTTA GTAAATATTA TTAAAACTAT GGTTTTAAGT AGAGGAAATG ATCCAAAAGA TGCTTTAATT GGTATAAAAC ACAATGTAAT TAATCTAGAA AAAATCATCA CTCACACTCC TTTTCAAACA TTTTTAAAAG AAAAAAAACA AAAATACAAA AATGCCGTTA TAGTCTCTAC TGGCCCTTCT TTAATCAAAC AACTTCCATT ATTAAAACAA TATCAAGAAA ATGTGGTGAT TTTTAGTGCT GATAGCTCTT ATCCTATATT AGCTAAAGAA GGAATCAAGC CTGATTATGT TTTTTCTTTA GAAAGAGAAG AGATGACTAG TGAATTTTTT AATAATGACT TTGGCAAATT TGATGAAAAT ATCTTATTTA TAATCTCTTC ACTAACTCAT CCTAAAACTA TAGAGTATTT AGAAAAAAAT GATAGAAAAT ACATGCTTGT TTTAAGACCA TTGTTTTTTG AGAGCAAGCT TGGCTTAAAA GAATATGGGT TTTTAGGAAA TGGCATGAGT GTGGCTAATA TGGCATATGA ATTAGCTGGG GCTTTAAGAT TTGAAAATAT TATTTTAATA GGGCAAGATT TAGCCTATAG TGATGATGGA AAATCTCATC CAAAAGAGCA TATATACGGA GATCAAGGCG ATGAAGAAGT AATTTATAAG CAAATTACTG CATATGGTGG AAAAGGTGTG GTAAATACTC AGCTTACATG GTATTTATTT TTAAAAAGTT TTGAAAAAGA TATAGCTTTA GCAAAAAATA TTTTAAAAAT CACTACTTAT AATGCAACAG AAGGTGGAGC TAGGATAGAA GGAACTATAG AAAAGCCTTT TAAAGAACTT TGTGAAGAAT TGTTTTTAGA AAAATTAGAC AAACAAATTT TTATCAAACC AAGCAAAGAC GCAGCAAAAA AAATTAAAAA ATGCAAAGAA AGATTAAAAC AACAAATCAA GCAAAGTGAA AATTTCATAA AAGAAAGTCT TAAGGCTATT GATGAAAAAA ATTTAGCAAA ATTAGAAAAA CTTAGAATAA AAATTCCAAA AAGTGATTTT TTTTCCGATA TATTACAAGC AAGACATTTT CAAAATGAAT GTGATGTTTT AAAATATAAA GTGGAAAAAG AAAAAGATGA AAATGTTTTT TTACAAAGTC AGATTGAATT TTTTAAAGAA ATAATTTTAT ATTTAAAAAA ATACAATGAA ACTATTAGTG AGAATTTAAA TGGATGA
|
Protein sequence | MNKELFLKNT QALFEVDQIL AYELRKINQI LNFKFMQDKI YSLQHQIYIM QNNNFDNNKF ELYPVLFFYG FGDGLFYKNL LKNPNLKHII IFEEELEILY LAFHLSDFSD LIKNEKIILF FTPNINTAQL KVLFNYQHIK YSAKIFNFHF YDEFYANFYM EKANALVQNL VNIIKTMVLS RGNDPKDALI GIKHNVINLE KIITHTPFQT FLKEKKQKYK NAVIVSTGPS LIKQLPLLKQ YQENVVIFSA DSSYPILAKE GIKPDYVFSL EREEMTSEFF NNDFGKFDEN ILFIISSLTH PKTIEYLEKN DRKYMLVLRP LFFESKLGLK EYGFLGNGMS VANMAYELAG ALRFENIILI GQDLAYSDDG KSHPKEHIYG DQGDEEVIYK QITAYGGKGV VNTQLTWYLF LKSFEKDIAL AKNILKITTY NATEGGARIE GTIEKPFKEL CEELFLEKLD KQIFIKPSKD AAKKIKKCKE RLKQQIKQSE NFIKESLKAI DEKNLAKLEK LRIKIPKSDF FSDILQARHF QNECDVLKYK VEKEKDENVF LQSQIEFFKE IILYLKKYNE TISENLNG
|
| |