Gene Cla_0165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_0165 
Symbolmaf3 
ID7410888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp146335 
End bp148212 
Gene Length1878 bp 
Protein Length625 aa 
Translation table11 
GC content26% 
IMG OID643717300 
Productmotility accessory factor 
Protein accessionYP_002574779 
Protein GI222823206 
COG category[S] Function unknown 
COG ID[COG2604] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.16921 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTA AAATTTTTAA AAAAAATCTT AAAGCATTAC AAGGCGAACA ATATAATAAC 
TTAAGAAAAA AACTTCAAAA AATAAAACAA TTAAAAGATT TTACCTATAT TATTGATAAA
GACCCGCTAA ATTGTAATGT CATTTTTCAA AGCACGAAAA AAATATATGA AAATCCTTTA
TTAGAATTAC AAGAGAGTTT AAAGCTTTTT CAGAATGATT ATGCAAGATA TCCTGTTTTA
TTTTTTTATG GGCTTGGAAA TGGAATTTTA TATAAAAGTT TATTAGCAAA TAAAGAACAT
AAAAAAATTA TAGTTTATGA AAAAGATATC GAGCTTATCT TTTTAGCCTT AAATATGATA
GATTTTTATG ATGAGCTTGG TAGTGGAAGA TTTATCATAA TTCATAATGA AGAAATGAGT
TACACTAAAG CTGATCTTTT ATGCTCATTT TTAAATTTAT TTTTAAAAAC ATATAATTTA
CATATTCATT CAAAATTTTA TGAAGAGCAA AAAAAAGATA TAGGCTATAT AAATACTTTA
AATGTTAAAG CTATTAGAAG TATAGCTTTA AGAAAAGGTA ATGATCCTGT AGATGCTATG
CAAGGAATGG AACAATTTGT TTTAAATTTA CCAAAAATGA TCAATCATCC AAGTTTTAAT
GAATTAAAGA AAAAAAGAGC CAACAAAAGC AAAAATGCAA TTTTAGTTGC CACTGGACCA
TCTTTAAAAA AACAACTTCC TTTGCTTAAA AAATATGCTA ACAACGCAAC TATATTTTGC
GTAGATAGTG CTTATAACAT ACTTGCTAAA GAAGGCATTA AACCTGATTA TGTTTGTATG
TTAGAAAGGG ATGATTTTGT TTCATCTTGT TTTGATAATG ATTTTAAAGA ATTTGATAAA
GATATTACTT TTATTTTAGC ATCACTAGTT TATAAAGATA GCATTGAGTT TTTAGAGAAA
AATAAAAGAA AATACATCTT AATTTCAAGA TCATATCCTT TTGCTTACTC TTTAGGGCTT
CATGAGTTTG GTTATATACA AGGTGGTATG AGTGTAGCGC ATATGAATGC TGAATTAGCA
ATTTTACTTG GCCATGAAAA TATTATCATG ATAGGGCAAG ATTTAGCTTA TGGCGATGAT
GGAAAAACAC ATAGTGATGG CTTTTTACAT GAAGATTATC ACAAAGATGA TTTTAAAAAA
GACAAAGGTA AATTTGAAAT TCAAGCATAT GGTGGAAAAG GTATAGTTCA AAGCTCTGAA
ATTTGGGTTT TATTCAAACA AGTATTTGAA AATTTAATTA GCAAAGAAAA AAGTGTTAAA
TTTTATAATG CAACAGAAGG TGGAGCTAGG ATAGAAGGAA CCATAGAAAA GCCTTTTAAG
GAACTTTGTG AAAAACTACT CACTAAAAAC ATAAAAAAAC CTTTTACAAA ATTACACCCT
TTAAAAAAAG ACCATCGAGA AAAATTAATG CTGCAAGCTT ATAAACGCAT AAAAGAGCAT
ATAAAAAATA GTCAAAAATT TTTAAAAGAA TGTAAAAAAT TATATAAAGC TTTAAATCAA
AAAAGCAAAA CTCGCTATAC TCTTAATGAA TTAAATGCTC AAATTGATGA TTTAAAACAA
TTATTAGAAA GCAATAAATT TATATTTTTA AGAGAGGTTG TAAGCCCTTC TTTATTTCAT
CTTGAAAGTA CATTTTCTAA AATTTATGTT CATGCTATGC ACAATGAAAG CGATAAGCAA
AATAAATTAG TTGCTTGGAT AGAAGCTCAT AAAGCTTGGG TGGAAGATAT TAGCGAACTT
GTGAATATCC AAGAAAAAGC TTTAAAAATA GCAATTATTC CTTTACAAGA TATCTTAGAA
AAGAAAAACT TAATTTAA
 
Protein sequence
MKTKIFKKNL KALQGEQYNN LRKKLQKIKQ LKDFTYIIDK DPLNCNVIFQ STKKIYENPL 
LELQESLKLF QNDYARYPVL FFYGLGNGIL YKSLLANKEH KKIIVYEKDI ELIFLALNMI
DFYDELGSGR FIIIHNEEMS YTKADLLCSF LNLFLKTYNL HIHSKFYEEQ KKDIGYINTL
NVKAIRSIAL RKGNDPVDAM QGMEQFVLNL PKMINHPSFN ELKKKRANKS KNAILVATGP
SLKKQLPLLK KYANNATIFC VDSAYNILAK EGIKPDYVCM LERDDFVSSC FDNDFKEFDK
DITFILASLV YKDSIEFLEK NKRKYILISR SYPFAYSLGL HEFGYIQGGM SVAHMNAELA
ILLGHENIIM IGQDLAYGDD GKTHSDGFLH EDYHKDDFKK DKGKFEIQAY GGKGIVQSSE
IWVLFKQVFE NLISKEKSVK FYNATEGGAR IEGTIEKPFK ELCEKLLTKN IKKPFTKLHP
LKKDHREKLM LQAYKRIKEH IKNSQKFLKE CKKLYKALNQ KSKTRYTLNE LNAQIDDLKQ
LLESNKFIFL REVVSPSLFH LESTFSKIYV HAMHNESDKQ NKLVAWIEAH KAWVEDISEL
VNIQEKALKI AIIPLQDILE KKNLI