| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0139 |
|---|
| Symbol | |
|---|
| ID | 7411371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | - |
|---|
| Start bp | 118366 |
|---|
| End bp | 119700 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643717275 |
|---|
| Product | anaerobic C4-dicarboxylate transporter |
|---|
| Protein accession | YP_002574754 |
|---|
| Protein GI | 222823181 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2704] Anaerobic C4-dicarboxylate transporter |
|---|
| TIGRFAM ID | [TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTAA TGATTATTTT ACAACTTATT GTCTTTCTTG GGGCAATATT CATAGGTATC
CGCCTTGGTG GCATAGCGAT AGGCTATGCT GGAGGTTTGG GCGTTGTTGT TTTAGGTCTT
GTTTTAGGAA TGAAGCCAGG TAATATTCCA TGGGATGTTA TCTTAATCAT TGCTGCGGCA
ATTGCAGCGA TTTCTGCTAT GCAGCAAGCT GGTGGTTTAG ATTATATGGT TAAAATTACC
GAAAGAGTTT TACGCAAACA TCCAAAATTT ATCAATTATC TTGCTCCAGC ATGCGGTTGG
CTGCTTACCA TTTTAGCAGG TACTGGTAAT GCGGTATTTT CATTAATGCC TGTTGTTATT
GATGTTGCAA AGTCTCAAAA CATCAAACCA TCGGCTCCAC TTTCATTAAT GGTTGTTGCC
TCACAAATTG GTATTACAGC TTCTCCAGTT AGTGCTGCTG TTGTTTATAT GACAGGTGTA
TTAGAACCAC TTGGTTGGAG CTATCCTGCA TTAATTGGAA TTTGGATAGT TACTACTTTT
ATTGCTTGTA TGGCTACAGC TTTCATAGTA AGTTTAATCA CTCCTATGGA TTTAAGCAAA
GATCCTGTAT ATCAAGAACG CTTAAAAGCT GGACTTGTAA AAAGTGCTTC TGATGTTTTA
CAAAGTGAAG ACAAACCAGG TGCAAAACTT TCAGTTGCAA TCTTTTTAAT CACGGTTTTA
TGTGTTGTTC TTTATGCTAC AGCGATTTCA AATAATATTA AATGGATTGA TCCAGTAGTT
ATCCCAAGAG ATGCTGCAAT TATGAGTTTC TTATTAACTG CTGCAACTTT AATTACATTC
TTATGTAAAG TTGAGCCTGC AAAAATTCTA AATACAAGTG TATTTAAATC AGGCATGACT
GCTTGTGTGT GCGTATTTGG TGTTGCTTGG CTTGGAAATA CTTTCGTTGC AGGTCATGAA
GCAGGTATTA AAGAAGTTGC AGGTGAATGG GTTAAACAAA CTCCAGCTAT GCTTGCAGTT
GCATTCTTCT TTGCCAGTAT GCTTTTATAC TCTCAAGCAG CTACTGCAAA AGCTATTGTT
CCAGTTATCA TTGCCGCATT AGGAATTTCA GCTACAAACC CAAGCGATTC TTATATGTTA
GTTGCTTGTT TTGCTGCCGT TTCAGCGCTT TTCGTTCTTC CAACCTACCC TACTTTATTA
GGTGCAGTTC AAATGGATGA TACAGGCACA ACAAGAATTG GAAAATTCAT ATTTAACCAC
GCATTCTTTA TCCCTGGTGT GTTAGCTATA GCTATAGCTG TTGCTTTAGG CTTTTTAGCG
GTAGGAATGC TTTAA
|
|---|
| Protein sequence | MDLMIILQLI VFLGAIFIGI RLGGIAIGYA GGLGVVVLGL VLGMKPGNIP WDVILIIAAA
IAAISAMQQA GGLDYMVKIT ERVLRKHPKF INYLAPACGW LLTILAGTGN AVFSLMPVVI
DVAKSQNIKP SAPLSLMVVA SQIGITASPV SAAVVYMTGV LEPLGWSYPA LIGIWIVTTF
IACMATAFIV SLITPMDLSK DPVYQERLKA GLVKSASDVL QSEDKPGAKL SVAIFLITVL
CVVLYATAIS NNIKWIDPVV IPRDAAIMSF LLTAATLITF LCKVEPAKIL NTSVFKSGMT
ACVCVFGVAW LGNTFVAGHE AGIKEVAGEW VKQTPAMLAV AFFFASMLLY SQAATAKAIV
PVIIAALGIS ATNPSDSYML VACFAAVSAL FVLPTYPTLL GAVQMDDTGT TRIGKFIFNH
AFFIPGVLAI AIAVALGFLA VGML
|
|---|
| |