Gene Cla_0117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_0117 
SymboliamB 
ID7411349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp101867 
End bp102979 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content30% 
IMG OID643717253 
Productputative ABC transporter, permease protein (DUF140 domain protein) 
Protein accessionYP_002574734 
Protein GI222823161 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein
[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.591838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA AAATCATCAA AGATGTTAAA AATCATGAAT GCATTTTTAG CGTCTTTGGT 
ATATGGGATA AAACTAGTGT AGGAAAATTG GAAAAATTAG ATTTTCCTAC TCAAAAAAAT
ATTATTTTTG ATTTTACAAA TTTAGATTTT ATAGATACTG CTGGGATTAG GTATTTTTTA
GCTTTAGAAA ATGAGTTAAA ACAAAAAGGT TTTGAGCTTA GCAGGGTAAA TCTTAAAAGC
GAGCATGCTA AGCTTTTTGA ACTTTGTCAA AAACATTACA AAAGCTTTTG TGATTCTTAT
GAAGATAAAA AAACAATCAA AGATTTTTTT GAAAATTTAG GAAAAAAGGT TGTTGAATCT
TTTACACTTT TGGTACAGTT TTTAAATTTC ATAGGGCTTA TTATAGCAAC TTGTTTTAAT
ACTTTATTTC ACTTAAAAAA ATTACGCTTT AGAGCATTTT TATATCATGT CGAAAATAGC
GCCATTAATG CTTTACCAAT CATAATGCTT ACATCTTTGC TCGTGGGTGT TGTTTTAGCT
TATCAAGCTG CTTATCAACT TGCGCAATTT GGAGCAAATA TTTATATAGT TGATTTAATG
GGAATTTCAG CTACTAGAGA GCTTGCGCCA TTAATTAGCG CTATTGTTAT AGCTGGTAGA
AGTGCAAGTT CATATACAGC TCAAATTGGA GTAATGAAAC TTACAGATGA AATTGATGCG
ATGAAAACTA TGGGTTTTAA AGAGAGTGAA TTTATCATTT TACCTAGAGT TTTAGCCTTA
GCACTTGCCA TGCCTTTGGT GGTAATAGTA GCTGATATTT TAAGTATTAT AGGTGGAATT
ATAGTTGCTT GGTTTAGCTT AGAAATTAGT GCAAGTGAGT TTATGAGTCG TTTTAAAGAA
GCAGTGGAGT TAAAACATAT CATCATAGGA CTTATAAAGG CGCCTATTTT TGGATTTTTG
ATTGCTTCTA TTGCTTGTTT TAGAGGATTT TTTGTGCAAA AAACTACTGA AAGCATAGGT
GTTTATACGA CAAAAAGTGT GGTAAATGCT ATTTTTTGGG TGATAGCTTT TGATGCGATT
TTTTCTGTGT TTTTGACAAA GGCTGGATTT TGA
 
Protein sequence
MKNKIIKDVK NHECIFSVFG IWDKTSVGKL EKLDFPTQKN IIFDFTNLDF IDTAGIRYFL 
ALENELKQKG FELSRVNLKS EHAKLFELCQ KHYKSFCDSY EDKKTIKDFF ENLGKKVVES
FTLLVQFLNF IGLIIATCFN TLFHLKKLRF RAFLYHVENS AINALPIIML TSLLVGVVLA
YQAAYQLAQF GANIYIVDLM GISATRELAP LISAIVIAGR SASSYTAQIG VMKLTDEIDA
MKTMGFKESE FIILPRVLAL ALAMPLVVIV ADILSIIGGI IVAWFSLEIS ASEFMSRFKE
AVELKHIIIG LIKAPIFGFL IASIACFRGF FVQKTTESIG VYTTKSVVNA IFWVIAFDAI
FSVFLTKAGF