Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0117 |
Symbol | iamB |
ID | 7411349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 101867 |
End bp | 102979 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 643717253 |
Product | putative ABC transporter, permease protein (DUF140 domain protein) |
Protein accession | YP_002574734 |
Protein GI | 222823161 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 0.591838 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATA AAATCATCAA AGATGTTAAA AATCATGAAT GCATTTTTAG CGTCTTTGGT ATATGGGATA AAACTAGTGT AGGAAAATTG GAAAAATTAG ATTTTCCTAC TCAAAAAAAT ATTATTTTTG ATTTTACAAA TTTAGATTTT ATAGATACTG CTGGGATTAG GTATTTTTTA GCTTTAGAAA ATGAGTTAAA ACAAAAAGGT TTTGAGCTTA GCAGGGTAAA TCTTAAAAGC GAGCATGCTA AGCTTTTTGA ACTTTGTCAA AAACATTACA AAAGCTTTTG TGATTCTTAT GAAGATAAAA AAACAATCAA AGATTTTTTT GAAAATTTAG GAAAAAAGGT TGTTGAATCT TTTACACTTT TGGTACAGTT TTTAAATTTC ATAGGGCTTA TTATAGCAAC TTGTTTTAAT ACTTTATTTC ACTTAAAAAA ATTACGCTTT AGAGCATTTT TATATCATGT CGAAAATAGC GCCATTAATG CTTTACCAAT CATAATGCTT ACATCTTTGC TCGTGGGTGT TGTTTTAGCT TATCAAGCTG CTTATCAACT TGCGCAATTT GGAGCAAATA TTTATATAGT TGATTTAATG GGAATTTCAG CTACTAGAGA GCTTGCGCCA TTAATTAGCG CTATTGTTAT AGCTGGTAGA AGTGCAAGTT CATATACAGC TCAAATTGGA GTAATGAAAC TTACAGATGA AATTGATGCG ATGAAAACTA TGGGTTTTAA AGAGAGTGAA TTTATCATTT TACCTAGAGT TTTAGCCTTA GCACTTGCCA TGCCTTTGGT GGTAATAGTA GCTGATATTT TAAGTATTAT AGGTGGAATT ATAGTTGCTT GGTTTAGCTT AGAAATTAGT GCAAGTGAGT TTATGAGTCG TTTTAAAGAA GCAGTGGAGT TAAAACATAT CATCATAGGA CTTATAAAGG CGCCTATTTT TGGATTTTTG ATTGCTTCTA TTGCTTGTTT TAGAGGATTT TTTGTGCAAA AAACTACTGA AAGCATAGGT GTTTATACGA CAAAAAGTGT GGTAAATGCT ATTTTTTGGG TGATAGCTTT TGATGCGATT TTTTCTGTGT TTTTGACAAA GGCTGGATTT TGA
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Protein sequence | MKNKIIKDVK NHECIFSVFG IWDKTSVGKL EKLDFPTQKN IIFDFTNLDF IDTAGIRYFL ALENELKQKG FELSRVNLKS EHAKLFELCQ KHYKSFCDSY EDKKTIKDFF ENLGKKVVES FTLLVQFLNF IGLIIATCFN TLFHLKKLRF RAFLYHVENS AINALPIIML TSLLVGVVLA YQAAYQLAQF GANIYIVDLM GISATRELAP LISAIVIAGR SASSYTAQIG VMKLTDEIDA MKTMGFKESE FIILPRVLAL ALAMPLVVIV ADILSIIGGI IVAWFSLEIS ASEFMSRFKE AVELKHIIIG LIKAPIFGFL IASIACFRGF FVQKTTESIG VYTTKSVVNA IFWVIAFDAI FSVFLTKAGF
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