Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0089 |
Symbol | |
ID | 7411321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | - |
Start bp | 77034 |
End bp | 78323 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 643717225 |
Product | conserved hypothetical protein, probable MFS transporter |
Protein accession | YP_002574706 |
Protein GI | 222823133 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 0.964688 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTAAAAA CTTTAAAAAG AAAAGACTAT AAAACACTCT CTCTGTCTTC TTTGGGTGGG GCTTTGGAAT TTTATGATTT TGTGATTTTT GTCTTTTTTG CTAATTATAT TGCAAAAAAT TTTTTCCCAA ACGAGATGAG CGATTTTTGG AAGCTTTTAA ACACTTATGG AGCCTTTGCA GCAGGCTATT TAGCTAGGCC GCTTGGTGGT ATAGTTATGG CTCATTTTGG TGATAAATTA GGCCGTAAAA AAATGTTTAT GCTAAGTATA TTACTCATGG TTCTTCCAAC TTTCTCTTTG GCTTTTATAC CTACTTATGA AAGTATAGGT TATTTAGCTC CGGTATTTTT ATTATTTATT AGAATAACTC AAGGTATAGC CATAGGCGGG GAATTGCCTG GTGCGTGGGT ATTTGCAAAA GAACACGCAC CCGAAGGTAA AGATAGTTTT TATATTAGTG CTATTAACGC ATCTATGGCT TTTGGCATTC TTCTAGGATG TGTTGTTTCA TTGGCGATCA ACTATTATTT TGATCAAAAA TCAATTTATG ATTATGCTTG GCGTATTCCA TTTGCCATAG GTGGATTTTT TGGCATTATT TCTATATATC TTAGAAAATT TCTAGATGAA ACACCTGTTT TTAAAAAAAT GTATCAAGAA AATAATTTAG AAAAATTCCC ACTAAAAACA TTTTTTAAAG AAAAAAATAT TTTTTTAGAC ATCATCGCTT CTATGCTTTT AACATGGATG CTAACAGCTT GTGTAATTAT ACTTATTCTA CTTATGCCAA ATTTTATACC AGAAATTTTA GTTCTTAATA AAATAGATGC TATTTTAATA CAGATGATTG CAATAGTGAT TTTATCTTGC GGGACCTTGC TTGCTGGAAT TTGGGTAGAT AAATTTGGCT TTTTAACTAC TAGTTTAATA TTTACAATAG GTTTTAGTCT TTCTTGCTTT TTTTATTTTT ACTTTTTTTA TGCACAAATT TTGCATTTAA GTATATATTT TTATTTTATT GCATGTTTTT TTGGTGGCAT TAATGCTCTA GCACCTATTT TGATGTGTAA AATCTTTAAA CCAAGCATTC GTTTTAGTGG AATATCTTTT TCATATAATA TAGCTTATGC TATAGCAGGT GGTTTTACAC CTCAACTTGT ATTCGCACTA CACTCTTTAG CTATAAGACC TGAAAATCCT TTTATTTATG GAATTTTTAT TTATATTTTA TTTTTATCTT CAACAACACT TCTAGCTACT GTATTTACTT ATAAGAAATT AAGATTTTAG
|
Protein sequence | MLKTLKRKDY KTLSLSSLGG ALEFYDFVIF VFFANYIAKN FFPNEMSDFW KLLNTYGAFA AGYLARPLGG IVMAHFGDKL GRKKMFMLSI LLMVLPTFSL AFIPTYESIG YLAPVFLLFI RITQGIAIGG ELPGAWVFAK EHAPEGKDSF YISAINASMA FGILLGCVVS LAINYYFDQK SIYDYAWRIP FAIGGFFGII SIYLRKFLDE TPVFKKMYQE NNLEKFPLKT FFKEKNIFLD IIASMLLTWM LTACVIILIL LMPNFIPEIL VLNKIDAILI QMIAIVILSC GTLLAGIWVD KFGFLTTSLI FTIGFSLSCF FYFYFFYAQI LHLSIYFYFI ACFFGGINAL APILMCKIFK PSIRFSGISF SYNIAYAIAG GFTPQLVFAL HSLAIRPENP FIYGIFIYIL FLSSTTLLAT VFTYKKLRF
|
| |