Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0076 |
Symbol | rpsE |
ID | 7410637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 64456 |
End bp | 64932 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 643717212 |
Product | 30S ribosomal protein S5 |
Protein accession | YP_002574693 |
Protein GI | 222823120 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0098] Ribosomal protein S5 |
TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 0.504275 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAATCAA ACTATAACCC AAAAGGAAGA TCGATGGAAA AATATAATAG AGAAGAATTT GAAGAAGTAA TCGTCGATAT CGGCAGGGTT ACTAAGGTTG TTAAAGGTGG TAGAAGATTT AGATTTACTG CTTTGGTTAT TGTTGGAAAT AGAAAAGGTT TAGTTGGTGT AGGTTATGGA AAAGCTAAAG AGGTTCCAGA TGCTATAAGA AAAGCAGTTG ATGATGCTTT TAAAAATATT GTTGAAGTTA AAACAAAGGG TTCAACTATC CCTCATGATG TAGAAGTAAA ATATAATGCA AGTAGAATTT TACTTAAACC AGCAAGTGAA GGTACAGGGG TAATCGCAGG TGGATCAACT CGTCCTATAG TAGAACTTGC AGGTATTAAA GACATTTTAA CTAAGTCTTT AGGTTCAAAC AATTCAGCAA ATGTAGTGCG TGCTACTATC AAAGCACTTA CAATGCTTAA AGGATAA
|
Protein sequence | MESNYNPKGR SMEKYNREEF EEVIVDIGRV TKVVKGGRRF RFTALVIVGN RKGLVGVGYG KAKEVPDAIR KAVDDAFKNI VEVKTKGSTI PHDVEVKYNA SRILLKPASE GTGVIAGGST RPIVELAGIK DILTKSLGSN NSANVVRATI KALTMLKG
|
| |