Gene Cla_0076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_0076 
SymbolrpsE 
ID7410637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp64456 
End bp64932 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content34% 
IMG OID643717212 
Product30S ribosomal protein S5 
Protein accessionYP_002574693 
Protein GI222823120 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0098] Ribosomal protein S5 
TIGRFAM ID[TIGR01021] ribosomal protein S5, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value0.504275 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATCAA ACTATAACCC AAAAGGAAGA TCGATGGAAA AATATAATAG AGAAGAATTT 
GAAGAAGTAA TCGTCGATAT CGGCAGGGTT ACTAAGGTTG TTAAAGGTGG TAGAAGATTT
AGATTTACTG CTTTGGTTAT TGTTGGAAAT AGAAAAGGTT TAGTTGGTGT AGGTTATGGA
AAAGCTAAAG AGGTTCCAGA TGCTATAAGA AAAGCAGTTG ATGATGCTTT TAAAAATATT
GTTGAAGTTA AAACAAAGGG TTCAACTATC CCTCATGATG TAGAAGTAAA ATATAATGCA
AGTAGAATTT TACTTAAACC AGCAAGTGAA GGTACAGGGG TAATCGCAGG TGGATCAACT
CGTCCTATAG TAGAACTTGC AGGTATTAAA GACATTTTAA CTAAGTCTTT AGGTTCAAAC
AATTCAGCAA ATGTAGTGCG TGCTACTATC AAAGCACTTA CAATGCTTAA AGGATAA
 
Protein sequence
MESNYNPKGR SMEKYNREEF EEVIVDIGRV TKVVKGGRRF RFTALVIVGN RKGLVGVGYG 
KAKEVPDAIR KAVDDAFKNI VEVKTKGSTI PHDVEVKYNA SRILLKPASE GTGVIAGGST
RPIVELAGIK DILTKSLGSN NSANVVRATI KALTMLKG