Gene Cla_0074 details

Gene Information

• Locus tag: Cla_0074
• Symbol: rplF
• ID: 7410635
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: +
• Start bp: 63569
• End bp: 64105
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 643717210
• Product: 50S ribosomal protein L6
• Protein accession: YP_002574691
• Protein GI: 222823118
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 43
• Plasmid unclonability p-value: 0.54113
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCACGTA TCGGTAAACA ACCAGTTGCT ATTCCAAGTG GAGTAGAAGT AAAATTAGAA 
GGTAATTTGC TTAAATTTAA AAAAGGAAAT TTAGCAAAAG AGCTTGATAC AAAAGCGAAT 
GTTAATGTTG AGATTAAAGA AGGTCAAATT CTTTTTTCTC CTAAAGGTGA AGACAGACAA 
AGTAGAGCAT ATTGGGGAAC TTATAGAGCT TTAACTCAAA ATATTATTAT AGGTTTAACT 
GATGGCTTTA GCAAGACTTT AGAAATTAAT GGGGTTGGTT ATAAGGCTGC ATTAAAAGGC 
AAAGTATTAG AACTTGCTTT AGGCTTTTCT CATCCTATAA ACTATGCTAT ACCAGAAGGT 
ATTGAGATCA CTGTTGATAA AAATAATATT ATTGTTAAAG GTAGTGATAA ACAAGTTGTA 
GGTCAAGTTG CTGCTCAAAT TCGTGAATTT AGACCACCTG AGCCTTACAA AGGAAAAGGT 
GTTAAATATT CTACTGAGCG TATTATACGC AAAGCTGGTA AAACATCTAA AAAGTAA 

 

Protein sequence

MSRIGKQPVA IPSGVEVKLE GNLLKFKKGN LAKELDTKAN VNVEIKEGQI LFSPKGEDRQ 
SRAYWGTYRA LTQNIIIGLT DGFSKTLEIN GVGYKAALKG KVLELALGFS HPINYAIPEG 
IEITVDKNNI IVKGSDKQVV GQVAAQIREF RPPEPYKGKG VKYSTERIIR KAGKTSKK