Gene Cla_0060 details

Gene Information

• Locus tag: Cla_0060
• Symbol: rplD
• ID: 7410621
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: +
• Start bp: 57793
• End bp: 58407
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 643717196
• Product: 50S ribosomal protein L4
• Protein accession: YP_002574677
• Protein GI: 222823104
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0088] Ribosomal protein L4

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 3.0492e-16
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAAAG TAACTGTTTT AAATGATAAA TTTGAAAAAG CTAGTGAGCT CGATCTTCCA 
GCAAAATATG CAGAAGTTAA TCCTCACAAC CTTTACTTAT ATGTAAAATC TTACCTTGCA 
AGTTTAAGAG CAAACACAGC TCACACTAAA GGTAGAAGTG ATGTAAGCGG TGGTGGTAAA 
AAACCATGGA GACAAAAAGG TCGTGGTGGC GCAAGAGCTG GTTCAACAAG AACGAATGTT 
TGGGTTGGTG GTGCTGTAGC ATTTGGTCCA AAAAACAACC GCAACTATTT CCAAAAAGTT 
AATAAAAAAC AAAAACGCTT AGCGCTTGAA AGAGCATTGG AAGATAAAGC AGCTAAAAAT 
GCATTATTCT CAGTAGATAG TTTAAGCATT GAAAGCGGTA AAACAAAAGA TGCGAATGCA 
GTTATTAAAA AGCTTGGTTT AAAAGATGTT TTAATAGTAA AAGATTTACT AGATGAAAAA 
ACACTTCTTG CATTTAGAAA TTTAGCAAAT TGCTATGTTG TAGATGTAAA TGAAGTTAAT 
GCTTATTTAG TATCTGTATT TAATGCTGTT ATTATTGAAA AAGCAGCGCT TGAATCTATC 
GTAAAAGAGG GTTAA 

 

Protein sequence

MSKVTVLNDK FEKASELDLP AKYAEVNPHN LYLYVKSYLA SLRANTAHTK GRSDVSGGGK 
KPWRQKGRGG ARAGSTRTNV WVGGAVAFGP KNNRNYFQKV NKKQKRLALE RALEDKAAKN 
ALFSVDSLSI ESGKTKDANA VIKKLGLKDV LIVKDLLDEK TLLAFRNLAN CYVVDVNEVN 
AYLVSVFNAV IIEKAALESI VKEG