Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0048 |
Symbol | nrdD |
ID | 7410609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 47512 |
End bp | 49791 |
Gene Length | 2280 bp |
Protein Length | 759 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 643717184 |
Product | anaerobic ribonucleoside triphosphate reductase |
Protein accession | YP_002574666 |
Protein GI | 222823093 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAA AATTTATTAT AAAAAGAGAT AAAAGCCAAG TTGCATTTGA TATTTTCAAA ATTAAAAATG CCATTTTTAA AGCTAATATA AACTCCATAG ATGAAAAATT AAATAATGAT TTTTTAGATA AGCTTTGCGA TGAGGTTGTA GCTTTACTGG ATGAAAAACA CATACAAGTA GAACAAATTC AAGATAAAGT TGAAGAAGTT TTAATCAAAA ACGCCTTAGT CAATACTGCA AAATCTTATA TTTTATACCG TCAAAAAAGA ACACAAATTC GCAACGGTAG CTACGATTTG CTAAGTTTAT ATGATGATTT AACTTTTAAA GATTCTAAAG AAGCTGATTT AAAAAGAGAA AATGCAAATA TTAATTCAGA TAGCGCTATG GGTATGATGT TAAAATATGG TTCAGAAGGA GCAAAATACT ATGTAGATGA GTGTATTTTG CCAAAACATA TCGCAAATGC ACATAAAAAC GGCGATATAC ACATACACGA TAAAGATTTT TATATGCTAA CACAAACTTG CTGTCAAATA GACTTATTAA AGCTTTTTGA AAATGGTTTT AGCACAGGAC ATGGAAGCTT GCGTGAGCCA AACGATATTA GATCTTATGC TTCTTTAGCT TGTATTGCCT TGCAGGCTAA TCAAAATGAG ATGCATGGGG GTCAATCTAT ACCCAATTTT GATTTTGCTA TGGCAAAAGG CGTGGCAAAG ACTTTTCAAA AAGAGTATAA AAAGGCTATA AATGCTTTTT TTGAAATAAA ATTAGAGCAA AGTTTGGATG AGCAATGCTT TAAAAATGCT AATTTTCAAG TTTCAAGCGA AAAAGAATGC TTCAAAGAGC TTTTAAAGCT TGAATTAAAT AGCGATGAGA ATTTTTTAAA ACAAGCAAAT GCTTATGCTT ATAAAAGAGC ATTAAAACAA ACTCAAGATG CGACTTTTCA AGCTATGGAA GCTTTAATAC ATAATCTTAA TACTATGAAC TCAAGAGCAG GAGCCCAAGT GCCTTTTAGT ACGCTAAATT ATGGTACCGA TACTTCTTTT GAAGGGCAAA TGGTAATAGA AAATTTACTC AAAGCTACGA TGAGAGGCTT AGGAAATGGC GAAACGCCAA TTTTCCCTGT GCAAATTTTT AAAGTAAAAG AGGGTGTTAA TTATAATGAA ACAGATCCAA ACTATAAGCT TTTTAAGCTT GCCATAGAAT GCGCTTCTAA AAGACTTTTT CCAAATTTTA GCTTTTTAGA TGCAAGTTTT AATGCAAAAT ACTATAAAAA GGGCGATTAT AATAGCGAAG TAGCTTATAT GGGTTGTAGA ACTAGGGTTA TGGCAAATGT TTATGATGAG AGCAAAGAAA TCACAAGTGG CAGGGGAAAT TTAAGCTTTA CAAGTATAAA TCTTGTGCGT TTAGCTATAG AAGCTAAAGG AAATTTAGAG CTTTTTTACT CACTTTTAAA AGAAAAATTA GAGCTTGTGT ATGAGCAATT ACTTCATAGA TACAAAATTC AAAGTCTAAA AAAGGTTAAA AATTTCCCAT TTTTAATGGG CGAGGGAGTT TGGATAGATT CAGATACTTT AAAAGAAAAT GATAGCGTAG AAAAAGTTAT TGCACACGGG ACTTTGGCTA TAGGTTATAT AGGACTTTGT GAGAGTTTAA TAGCTTTGAT AGGTTCTCAT CATGGACAAA GTCAAGAAGC AAGGGAGCTT GGCTTGCAAA TCGTGCGTTT TATGCGTGAA TTTATCGATG AAAAAGCGCG TAAAGATAAA CTGAATTTTT CACTCATAGC TACCCCAGCT GAAGGTTTAA GTGGGAGATT TTTAAAGCTA GATCAAAAAA AATACGGCAT TTTAAAAGGC ATAACTGATA AAGAATTTTA TACTAATTCC TTTCATATTC CTGTAGATTT TCCTATCAAT ATCTATGAAA AAATTCAAAT AGAAGCCCCA TATCATGAGT TAAATAATGG TGGGCATATT ACTTATGTAG AATTAAATGG CGATGTAAGT AAGAATTTAG AAAGTTTTGA ACGCATTATA AAATGCATGA AAGAAAGCAA TATAGGCTAT GGCTCGATTA ATTTCCCTCT AGATAGAGAT CCAGTATGTG GCTATAGTGG CGTGATAGAT GAGTTTTGTC CAAAGTGTCA TAGAAAAGAA GATGATATTA AATTTGAACG CATCAGAAGA ATCACGGGTT ATTTAGTAGG AACGCTTGAT CGTTTTAATG ATGCTAAAAA AGCTGAAGTT CATGCAAGAA TTAAGCACGA TTTTTCTTAG
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Protein sequence | MKIKFIIKRD KSQVAFDIFK IKNAIFKANI NSIDEKLNND FLDKLCDEVV ALLDEKHIQV EQIQDKVEEV LIKNALVNTA KSYILYRQKR TQIRNGSYDL LSLYDDLTFK DSKEADLKRE NANINSDSAM GMMLKYGSEG AKYYVDECIL PKHIANAHKN GDIHIHDKDF YMLTQTCCQI DLLKLFENGF STGHGSLREP NDIRSYASLA CIALQANQNE MHGGQSIPNF DFAMAKGVAK TFQKEYKKAI NAFFEIKLEQ SLDEQCFKNA NFQVSSEKEC FKELLKLELN SDENFLKQAN AYAYKRALKQ TQDATFQAME ALIHNLNTMN SRAGAQVPFS TLNYGTDTSF EGQMVIENLL KATMRGLGNG ETPIFPVQIF KVKEGVNYNE TDPNYKLFKL AIECASKRLF PNFSFLDASF NAKYYKKGDY NSEVAYMGCR TRVMANVYDE SKEITSGRGN LSFTSINLVR LAIEAKGNLE LFYSLLKEKL ELVYEQLLHR YKIQSLKKVK NFPFLMGEGV WIDSDTLKEN DSVEKVIAHG TLAIGYIGLC ESLIALIGSH HGQSQEAREL GLQIVRFMRE FIDEKARKDK LNFSLIATPA EGLSGRFLKL DQKKYGILKG ITDKEFYTNS FHIPVDFPIN IYEKIQIEAP YHELNNGGHI TYVELNGDVS KNLESFERII KCMKESNIGY GSINFPLDRD PVCGYSGVID EFCPKCHRKE DDIKFERIRR ITGYLVGTLD RFNDAKKAEV HARIKHDFS
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