| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0026 |
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| Symbol | |
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| ID | 7410587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | + |
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| Start bp | 27143 |
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| End bp | 29128 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 643717162 |
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| Product | conserved hypothetical integral membrane protein, putative oligopeptide transporter, OPT family |
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| Protein accession | YP_002574645 |
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| Protein GI | 222823072 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1297] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00728] oligopeptide transporters, OPT superfamily
[TIGR00733] putative oligopeptide transporter, OPT family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCATACAA AAAACTCACT ACCGGAGCTT ACGCTTAGGG GTATAATACT AGGAAGTATT
TTAACGATTA TTTTTACCGC CTCAAATGTA TATTTGGGGC TTAAAGTTGG TCTTACTTTT
TCTACTTCTA TCCCTGCTGT TGTGATTGCA ATGGCTGTTT TAAAAATCTT TAAAGACTCT
AATATTTTAG AAAATAATAT GGTTCAAACT CAAGTTTCAG CCGCAGGTAC GCTTTCGGCT
GTGATTTTTG TTATACCAGG TCTTTTTATG TGTGGATATT GGTTTGAATT TCCTTTATGG
CTTACTTTTA TGCTCTGTCT TTGTGGGGGT GGATTGGGCG TGCTTTTTAC TATACCTTTG
CGTAGAGCCA TGGTGGTAGA GAGTAAATTA GCTTATCCTG AAGGAAGAGC TGCTGCTGAA
ATTTTAAAAG TAGCTAATAA AGATCAAGCT GATAAAAAAG GAAAAGTAGG CTTAAAAGAA
ATCACACTTG GTGTGGCTTT TGCTTCTATA ATAAGTCTTT TTTCAAGCGG TTTTAAACTA
CTTTCAAGTG GAAGTAGTTT TGCATTCATT TGGCAAAAAA TGACTTTTGG CTTTTCTATG
GGTTATTCAG TGGCGCTTTT GGGCGCTGGA TATTTAGTGG GTATAGCTGG AGGTGTTGCA
TTGCTTGCGG GTATGGTGCT TGCTTGGATG GTTTTTGTGC CATATTTTTC TGCTAAAGAA
AGCTTTGATG CGAGTTTAAG TGCACTTGAT ATAGCTAATC AAATTTGGGC TCAAAAGGTG
CGTTTAATAG GCACAGGAGC TATAGCTATA GCAGCATTAT GGACTTTAAT AGAACTTACA
AAACCTGTAT ATGATGGCAT GAAAAATATG CTTAAAAAAA CCTCATTAAA TCTCTCACAA
GATCCTAAAG ATATGGATTT ATCTTTAAAA GCTATGCTAG GTTTATTTGT ACTTATGTGT
ATAGGTTTGT TTGTTTCATT TTATGCTTTT GTGGCTGATT CAAATTTAGC AAGTGGTTAT
CAAATTCTTT TTGCCTTGGT AGGAACTTTA GTAGCTATTT TCATAGGCTT TTTTGTAGCT
TCTGCTTGTG GGTATATGGC AGGTTTGGTG GGTTCATCAT CTTCTCCTAT TTCGGGTATA
GGGCTTATTG GGATTATGAT TTCTTCTTTG ATTATTTTAC TTTTGGGATA TCAAGTAGAT
TTATTTAGCG ATCCTTTAAT GTCTAAATTT GCCATCGCTT TTGCTATATT TACTACTAGT
GTTATTTTAG CAACTGCTGC TATTTCTAAT GATAATTTAC AAGATTTAAA AACGGGATAT
TTAGTGGGTG CAACTCCTTG GAAACAACAA GTTTCTTTGA TTATAGGTTG TGTATTTGGA
GCTTTAGCTA TAGCTCCTGT TTTAAATTTA TTATACCAAG CTTATGGTTT TGTGGGTGCA
ATGCCAAGAG AGGGAATGGA TGAGGCAAAT GCGCTTGCTG CACCGCAAGC AAATTTGATG
AGTACCATAG CGCAAGGTAT TTTTAATGCT AATATTGATT GGAGTTATAT TATAGCGGGA
GCCTTTGTGG GTGTTGGTAT AATTATCATC GATCGTTTAT TGAGAAAGAA AAATATGTCT
TTACCACCTT TAGCTGTGGG CATAGGTATA TATTTACCAC CTGCTGTTAA TATGCCTTTG
TTTATAGGTG GATTATTAGC GTATTTAATT AAAAAGCGTT TAGAGCAAAG ATATGCTAAA
AATGCACATA AAAAAGAACT CATTCAAGAG CATGAGCAAA AAGGAACCTT ATTTGCCTCT
GGTTTGATAG TAGGTGAGAG TTTATTTGGA GTGCTAATAG CTGGTTTAAC TGTGCTTTCT
ATTAGTAGAG GTGGGGCTGA AGATCCACTT GCTATTGTAA CTTCATTTAA AGACGATGGG
GTTATAGGTT TTGTAGTTTT TGTAGCGATT ATGCTAATTT TTGCAAGAAG AGTACTTAAA
AAATGA
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| Protein sequence | MHTKNSLPEL TLRGIILGSI LTIIFTASNV YLGLKVGLTF STSIPAVVIA MAVLKIFKDS
NILENNMVQT QVSAAGTLSA VIFVIPGLFM CGYWFEFPLW LTFMLCLCGG GLGVLFTIPL
RRAMVVESKL AYPEGRAAAE ILKVANKDQA DKKGKVGLKE ITLGVAFASI ISLFSSGFKL
LSSGSSFAFI WQKMTFGFSM GYSVALLGAG YLVGIAGGVA LLAGMVLAWM VFVPYFSAKE
SFDASLSALD IANQIWAQKV RLIGTGAIAI AALWTLIELT KPVYDGMKNM LKKTSLNLSQ
DPKDMDLSLK AMLGLFVLMC IGLFVSFYAF VADSNLASGY QILFALVGTL VAIFIGFFVA
SACGYMAGLV GSSSSPISGI GLIGIMISSL IILLLGYQVD LFSDPLMSKF AIAFAIFTTS
VILATAAISN DNLQDLKTGY LVGATPWKQQ VSLIIGCVFG ALAIAPVLNL LYQAYGFVGA
MPREGMDEAN ALAAPQANLM STIAQGIFNA NIDWSYIIAG AFVGVGIIII DRLLRKKNMS
LPPLAVGIGI YLPPAVNMPL FIGGLLAYLI KKRLEQRYAK NAHKKELIQE HEQKGTLFAS
GLIVGESLFG VLIAGLTVLS ISRGGAEDPL AIVTSFKDDG VIGFVVFVAI MLIFARRVLK
K
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