| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0017 |
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| Symbol | |
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| ID | 7410578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | - |
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| Start bp | 16105 |
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| End bp | 16866 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 643717153 |
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| Product | putative ribosomal pseudouridine synthase |
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| Protein accession | YP_002574636 |
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| Protein GI | 222823063 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 64 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATTA ATAAATTCAT CTCACACAAT AGCAAATATT CTCGCCGTGA GGCTGATGAG
CTAATCAAGC AAGGCTTAGT AAAAATCAAT AAAAAAACAG CCTTGCTAAA TGATAGTGTA
AATGCTGAAG ATAAAGTTTT TATCAATGGT AAAAAACTCC ATAAAAAAAC ACAATTTTCA
GTCATCATTT ATCACAAACA AAAAGGTGAA ATAGTTAGTA AAAAAGATGA TAGAGGTAGA
AAAACCATTT ATCATACCCT GCCAAAACAA TTTAGCACAT GGCTTAGCGT TGGTAGGCTT
GACTTTGCAA GTGAAGGTTT GCTTTTATTA ACCGATTCTC CTGTGATTGC AGATGCGTTG
ATGCATAGTG ATTTAGAAAG AGAATATTAC TTGAAAGTAA AAGGTAATAT AGATAAAAAT
GTCATCGAGG CTATGCAAAA TGGCTTAGAA ATTCAAAATG AAAAAAAAGG AGCTCATGCC
AAAACTAAAA TAACCTCAAT GAGTTTTGCT CCATTTTTAG GCTTTGAAAT TTTTGGCTCA
AGCGGAGGCT ATACGAAGCT AAAAGTAATC ATTAATGAAG GTAAAAATAG AGAACTAAGA
CGCTTTTTTG GACATTTTGA TTTAGAAGTG ATGGATCTTA AAAGAGTAGC TTTTGGAGCA
TTAGATCTTG GTATGTTAAA AGCTGGCAAA TATCGTTATT TGGAAAATGG CGAGTATGAA
AAACTACGCG ATTTTTTAAA GACAAATAAT ATAAAATATT AA
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| Protein sequence | MRINKFISHN SKYSRREADE LIKQGLVKIN KKTALLNDSV NAEDKVFING KKLHKKTQFS
VIIYHKQKGE IVSKKDDRGR KTIYHTLPKQ FSTWLSVGRL DFASEGLLLL TDSPVIADAL
MHSDLEREYY LKVKGNIDKN VIEAMQNGLE IQNEKKGAHA KTKITSMSFA PFLGFEIFGS
SGGYTKLKVI INEGKNRELR RFFGHFDLEV MDLKRVAFGA LDLGMLKAGK YRYLENGEYE
KLRDFLKTNN IKY
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