| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_2723 |
|---|
| Symbol | |
|---|
| ID | 7408293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerocellum thermophilum DSM 6725 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012034 |
|---|
| Strand | + |
|---|
| Start bp | 2875206 |
|---|
| End bp | 2876003 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643717080 |
|---|
| Product | polysaccharide deacetylase |
|---|
| Protein accession | YP_002574549 |
|---|
| Protein GI | 222530667 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAA GCTATCTGTT TCCTAATGGC AGGTCCAAGG CTCTTACAGT AAGCTATGAT
GACGGACAGG TATATGACAG AAAACTTGTC AGCATATTTA ACGAATACGG GATTAAAGGA
ACCTTCTTTT TAAACTCTGA AACTCTTGGC AAAGACATCT TTATCCAACC TGATGAAGTT
GTAACTCTTT ATAAAGGGCA TGAAGTTGGC ATACATGCAA AAACCCATCC TTTTTTAGAT
TCTATACCCC TTGAAGGTAT AATCGAAGAA ATTATTGAGG ACAGGAAATT TTTAGAAGGT
ATGGTTGGAT ATCCTGTCAA AGGAATGTCA TATCCATATG GAGTTTATAA TGAAGATGTG
ATAAAAATTT TACCATCACT TGGCATTGAG TATTCAAGGA CAGTAAATTC AACTTATAAC
TTCAACATGC CAGAAAATTT TATTGTTTGG AATCCCACAT GCCACCACAA ACAAAATCTG
CTGGAAATTA CAAAAAGATT TTTGGAAATA GAAAACAAAA ATCAGCTTCA GCTTTTGTAT
GTGTGGGGAC ACAGTTTTGA ATTTGAACGA GAAAACAACT GGGATTTGAT TGAAGAGTTC
TGCAAGATGA TTTCAAAAGC AAGTTCTGTC TGGTTTGCGA CAAATATTGA AATTGTAAGA
TACGTCAAGG CATTGAAAAT GCTTGAGTTT TCTGTAGAAA GAGATGTTGT TTATAATCCT
TCGGCTATTT CAGTATGGCT TTTGGTAAAT GGCAATGTTG TTGAGGTAAG CGGTGGTCAG
ATTGTAACTC TTAAATAA
|
|---|
| Protein sequence | MKVSYLFPNG RSKALTVSYD DGQVYDRKLV SIFNEYGIKG TFFLNSETLG KDIFIQPDEV
VTLYKGHEVG IHAKTHPFLD SIPLEGIIEE IIEDRKFLEG MVGYPVKGMS YPYGVYNEDV
IKILPSLGIE YSRTVNSTYN FNMPENFIVW NPTCHHKQNL LEITKRFLEI ENKNQLQLLY
VWGHSFEFER ENNWDLIEEF CKMISKASSV WFATNIEIVR YVKALKMLEF SVERDVVYNP
SAISVWLLVN GNVVEVSGGQ IVTLK
|
|---|
| |