Gene Athe_2661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_2661 
Symbol 
ID7407025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp2797214 
End bp2799637 
Gene Length2424 bp 
Protein Length807 aa 
Translation table11 
GC content36% 
IMG OID643717027 
ProductCRISPR-associated helicase Cas3 
Protein accessionYP_002574496 
Protein GI222530614 
COG category[R] General function prediction only 
COG ID[COG1203] Predicted helicases 
TIGRFAM ID[TIGR01587] CRISPR-associated helicase Cas3 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTATT ATTCTCACAA AAATCCTGAT AAGCTTCTTT ATGATCATCT TCTTGAAGTT 
TATCACTATG CTATGGAGGC AAATGTGGAG CTAAAAAGCT GGGAAAAAGA AGCACTGCAA
ATTATATGTC TTTGTCATGA CTTTGGGAAA TTTACAACAT TTTTTCAAAG TCATCTTAGC
GGTGTATCAA GCAAGCATTC ACAGCATGGT TTTTTATCAG CCATCTTTGG AGTATTTTGC
TGGATGCAAA AGAAAGGACT GTGTTTACAA AAGATGAACT CCCCAGCTTC TTTAGATGAA
GTCATATCTC TTTTGATTTA CGCTTGCATT CTTCACCATC ACGGAGATGC CAAGGATATT
AGCAAGAACC TGCCAGAAAA ATTTGCAGGG GATTTCAAGG CAGATATAAA CCTTGTTCAG
AAAATAGATG ATGCCTATGT TCAGATTGAG GATTTGAGGT GCAATGCTGA GGATATAAAA
CCTTTGCTTG AAAAAATTGG ACTTGGCAAT AAATTTGAAA AGTTTTTAGC ACAGCAAAGG
GGTTTTATAG AGGATATCCT AAGATATCTT AAAAAAATTG AATATGGCAT TCGCTTTATT
GGTTTGATAC CGCAGGCTTT CAAAGATGGA ACTGAGCTTT ATTTTGTCCA GCAAAAGTTG
TATTCTCTTC TCATATGGGC AGACAAGATG TCGGCTGCAA ATTACAAGGT ACTGTCGCCC
TGCTATGCTT CGTTAGATAG ACTTATTGTG GCAAGAGACA AAGTTATCAA ACCGACTCAA
GATAAAAATC TGCATAGAAT AAGACAAAGT GTGTTTGAGG CTGTACTTTC AAATATTGAA
AAGAATAAGG AAAAAGACAT ATTTTCGATC ACAACTCCAA CAGGCACAGG GAAGACTTTG
GCAGGAGTGT TTGCAGCAGT AAAACTGAAA GAAATTTTGA AAAAGTCTGG AAGGATAATA
TATGCTCTTC CATTCACCTC TATAATAGAC CAGAACTATG ATGTTGTCAA AAATCTATTT
GAGACAATAG AAGATTTTGG AAAAAACAGA GACAGGTACT TGTTAAAACA CCATCATTTA
ACTGATGTTG AGTTCAGGGG GAAAGAAGGA GCGCTAAAAG AAATTACAGA TGAAATTACT
GTATTTGAAA AAGTTGCTTC AGAGTGTTTT ATAGAAAACT GGACATCTGG GTTTGTAGTG
ACAACATTTG TTCAGCTGCT TGAAACTTTA ATTTCAAACA GAAACAGGAT GCTCAAAAAG
TTCCATGCTT TTTACGATTC AGTACTCCTC CTTGATGAGA TTCAGGCAAT TGATGTTGAG
CTTCTGCCGC TTGTTGAAGA GGTCTTGAGA AAACTGACAC AGCTTTTCAG GTGCAAGATT
ATTCTCATGA CAGCCACAAA ACCGCTTATA TTCGAAGATG CTTGTGAGCT TGCAGGGTTT
TGTGACTATT CAATTTTTAA CAGAACAAAG CTTATGTATC ACCACAGCGA TTTAAAAGTA
GCTGAATTTG TGGATTTCTT CTCAGAAGAC ATATATGAAG ACGAAAAATC GTTTTTGATT
GTTGCCAACA CCATAAACCA GTCGCATCAA ATCTACAATG GCATAAAAAA CAACCTCAAA
AATAAAGAGG TCATTTACCT TTCAGCAAGC CTTGTACCAA AAGATAGAAA AGATATTATA
AAGAAAATAG AAAAAATGTT AGAAAGCGGA GCAAAACCCA TTGTTGTTTC AACTCAGGTG
ATTGAGGCAG GGGTAGACAT TGACTTTGAT TGTGTAATAA GAGACATAGC TCCTATTGAT
TCAATAATCC AGTGTGCAGG AAGGTGCAAC AGGCACAATG AAAAAAGCCA GGGCAATGTG
CTGGTTGTAA ACATGAAAGA TGAAAGTGGC ATAACCTTTG CAAAAAGAGT TTATGGCAAC
ACGGCAATTG AAATATCAAG AGGACTTCTT TTGAAGCATC CCGAAGTGGA AGAAAAAGAC
TATGGTATGC TGATTGATAA TTATTTCAGG ATGATAAAAG AAAATAAATC ATTTAAAAAA
TCTGAAGAAT TTTTGAAGGC AATAAGGCTT TTAAAGTTTG ACAGTATTCT GGAAAAGGAA
GAACTCACAA TCTCAAGGTT TAGTCTTATC CAGCAGCGGG GTGGGTATGT CAGCGTCATC
ATAAGAAACA ACCAAGAAAT AGAAGATACG TATGAGAAGT ATATAAACTC TTTTTCCATA
AAGGATTATT ACAAAAGAAG AGAAATATAT CTTGAGCTCA AAAATATCCT TTTTGAATAC
ACAATTTCCG TGCCAGTAAA ATACGCCCAG ATTTTTGATG AAGAGAAAGG AATATTATCT
TTGCCACCCA CATCCTGTGA GCGATACTAC AGTCCCGAGA CAGGATTTGT GTATGACCCA
AACGACAATG TCATTTTTGC TTGA
 
Protein sequence
MEYYSHKNPD KLLYDHLLEV YHYAMEANVE LKSWEKEALQ IICLCHDFGK FTTFFQSHLS 
GVSSKHSQHG FLSAIFGVFC WMQKKGLCLQ KMNSPASLDE VISLLIYACI LHHHGDAKDI
SKNLPEKFAG DFKADINLVQ KIDDAYVQIE DLRCNAEDIK PLLEKIGLGN KFEKFLAQQR
GFIEDILRYL KKIEYGIRFI GLIPQAFKDG TELYFVQQKL YSLLIWADKM SAANYKVLSP
CYASLDRLIV ARDKVIKPTQ DKNLHRIRQS VFEAVLSNIE KNKEKDIFSI TTPTGTGKTL
AGVFAAVKLK EILKKSGRII YALPFTSIID QNYDVVKNLF ETIEDFGKNR DRYLLKHHHL
TDVEFRGKEG ALKEITDEIT VFEKVASECF IENWTSGFVV TTFVQLLETL ISNRNRMLKK
FHAFYDSVLL LDEIQAIDVE LLPLVEEVLR KLTQLFRCKI ILMTATKPLI FEDACELAGF
CDYSIFNRTK LMYHHSDLKV AEFVDFFSED IYEDEKSFLI VANTINQSHQ IYNGIKNNLK
NKEVIYLSAS LVPKDRKDII KKIEKMLESG AKPIVVSTQV IEAGVDIDFD CVIRDIAPID
SIIQCAGRCN RHNEKSQGNV LVVNMKDESG ITFAKRVYGN TAIEISRGLL LKHPEVEEKD
YGMLIDNYFR MIKENKSFKK SEEFLKAIRL LKFDSILEKE ELTISRFSLI QQRGGYVSVI
IRNNQEIEDT YEKYINSFSI KDYYKRREIY LELKNILFEY TISVPVKYAQ IFDEEKGILS
LPPTSCERYY SPETGFVYDP NDNVIFA