Gene Athe_2659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_2659 
Symbol 
ID7407023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand- 
Start bp2795649 
End bp2796641 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content36% 
IMG OID643717025 
ProductCRISPR-associated protein Cas1 
Protein accessionYP_002574494 
Protein GI222530612 
COG category[L] Replication, recombination and repair 
COG ID[COG1518] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03641] CRISPR-associated endonuclease Cas1, HMARI/TNEAP subtype 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAAG ACCTTTATGT TTTCAATTCT GGGTTTTTAA GAAGGAAAGA TAACACCATC 
ATGTTTGAAA CAGATGAAGG CAAAAAGTAT TTTCCGGTAG AAGAGATAGA ATCAGTTTTT 
ATATTTGGAG AGGTTGACAT AAATAAAAGA TTTTTGGAGT TCATGACAGA AAAGAATATA 
TGTGTCCATT TTTTTAACAG GTATGAGTAC TACGTTGGCA CATACTACCC GCGCGAACAT 
TACAACTCAG GCATTGTGAT ACTCAAGCAG GTAGAATTTT ACAACGACTA CAACAAAAGA 
ATGACCATTG CAAGGTCAAT TGTTGAAGGA GCTGTTCTAA ATATGCTTGT GGTTCTGAGG 
TACTACAATT CCCGTGGAAA TATGCTAAAA GATGAGATAG AGACAATCGA AAGAATGCGC 
CATAACATAA ACTCCTGTGA TGATGTAAAT ACGCTTATGG CTTTGGAGGG GAATATAAGA 
GAAATCTACT ACAGGTGTTT TAACAAGATA CTGGATAATG AAAATTTTAC ATTTGTCCGC 
AGGAGCAAAA ATCCGCCTCT TGACAGGATA AATGCTCTGA TTAGCTTTGG GAATTCTCTT 
TTGTATGCTA CAACTCTTGG AGAGATTTAC CAAACACAGC TTGACCCGCG CATAGGATAT 
CTGCATTCCA CAAACCAGCG CAAGTTTTCA TTGAACTTAG ATATTTCCGA AATCTTCAAA 
CCCATAATTG TTGACAGGGT AATTTTTTCT CTTGTTAACA AGAAAGTGCT GAGCGAAAAA 
CATTTTGAAA AAGAACTAAA CGGCATTATA TTGAACGACC AGGGCAAAAA ATTGTTTGTC 
TCTGAGTATA ACCAGAAGCT CTACTCTACT ATAATGCACC CGAAACTGAA TACTCAAGTA 
AGTTACAAAA GGCTCATCCG AATGGAAGCA TACAAGCTCC AAAAATTGTT TTTGGAAAAT 
ATAGAATACA AACCTTTTGT TGCAAGGTGG TAG
 
Protein sequence
MKKDLYVFNS GFLRRKDNTI MFETDEGKKY FPVEEIESVF IFGEVDINKR FLEFMTEKNI 
CVHFFNRYEY YVGTYYPREH YNSGIVILKQ VEFYNDYNKR MTIARSIVEG AVLNMLVVLR 
YYNSRGNMLK DEIETIERMR HNINSCDDVN TLMALEGNIR EIYYRCFNKI LDNENFTFVR 
RSKNPPLDRI NALISFGNSL LYATTLGEIY QTQLDPRIGY LHSTNQRKFS LNLDISEIFK 
PIIVDRVIFS LVNKKVLSEK HFEKELNGII LNDQGKKLFV SEYNQKLYST IMHPKLNTQV 
SYKRLIRMEA YKLQKLFLEN IEYKPFVARW