Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Athe_2587 |
Symbol | |
ID | 7409541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerocellum thermophilum DSM 6725 |
Kingdom | Bacteria |
Replicon accession | NC_012034 |
Strand | + |
Start bp | 2725895 |
End bp | 2726587 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643716951 |
Product | ABC transporter related |
Protein accession | YP_002574425 |
Protein GI | 222530543 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | [TIGR03608] putative bacteriocin export ABC transporter, lactococcin 972 group |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000435089 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGAAT TAAAGGATAT AAAAAAGGTG TACAGTCTTG GGAAGGTGGA ACTTGAAGTA CTCAAAGGAA TTTCTCTTAA AGTAGAAAAA GGAGAATATG TTGCAATTGT AGGTCCTTCT GGTTCTGGCA AATCAACGTT AATGAACATC ATCGGGCTTC TTGACAAGCC CACTTCAGGA AGTTATCTTC TGGATGGTCT TGAGGTGTCA ACATTGAACG ACATGCAGCT TGCATCGCTT AGAAACAAAA ATATAGGTTT TGTTTTTCAA TCATTCAACC TGCTTAGTAA ACTCAATGCC CTTGAAAACG TTGAACTTCC AATGATATAC GCAAAAATTC CTCCCAAGGA AAGAAGACAA AGGGCTCTTT CTGCTTTAGA GCGTGTTGGT CTTTCAGACA GAATTTATCA CAGACCAAAT GAGCTCTCAG GTGGTCAGCA GCAAAGAGTT GCCATTGCAC GTGCAATTGT TATGAATCCT TCTTTCTTGC TTGCCGATGA GCCAACTGGA AACTTAGATA CTGCATCCAG TATTGAAATA ATGAAGATAT TCCATGAACT GAACAAAGCC GGTACAACCA TAATAATGGT AACCCATGAA CAGGACATTG CAAACCATGC AAAGAGAATC ATCAGAATCA GAGATGGTAT GATAATTGAT GATGCCCCGG TAAAAAACAG GATAACATAC TAA
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Protein sequence | MIELKDIKKV YSLGKVELEV LKGISLKVEK GEYVAIVGPS GSGKSTLMNI IGLLDKPTSG SYLLDGLEVS TLNDMQLASL RNKNIGFVFQ SFNLLSKLNA LENVELPMIY AKIPPKERRQ RALSALERVG LSDRIYHRPN ELSGGQQQRV AIARAIVMNP SFLLADEPTG NLDTASSIEI MKIFHELNKA GTTIIMVTHE QDIANHAKRI IRIRDGMIID DAPVKNRITY
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