Gene Athe_2587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_2587 
Symbol 
ID7409541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp2725895 
End bp2726587 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content39% 
IMG OID643716951 
ProductABC transporter related 
Protein accessionYP_002574425 
Protein GI222530543 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID[TIGR03608] putative bacteriocin export ABC transporter, lactococcin 972 group 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000435089 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAAT TAAAGGATAT AAAAAAGGTG TACAGTCTTG GGAAGGTGGA ACTTGAAGTA 
CTCAAAGGAA TTTCTCTTAA AGTAGAAAAA GGAGAATATG TTGCAATTGT AGGTCCTTCT
GGTTCTGGCA AATCAACGTT AATGAACATC ATCGGGCTTC TTGACAAGCC CACTTCAGGA
AGTTATCTTC TGGATGGTCT TGAGGTGTCA ACATTGAACG ACATGCAGCT TGCATCGCTT
AGAAACAAAA ATATAGGTTT TGTTTTTCAA TCATTCAACC TGCTTAGTAA ACTCAATGCC
CTTGAAAACG TTGAACTTCC AATGATATAC GCAAAAATTC CTCCCAAGGA AAGAAGACAA
AGGGCTCTTT CTGCTTTAGA GCGTGTTGGT CTTTCAGACA GAATTTATCA CAGACCAAAT
GAGCTCTCAG GTGGTCAGCA GCAAAGAGTT GCCATTGCAC GTGCAATTGT TATGAATCCT
TCTTTCTTGC TTGCCGATGA GCCAACTGGA AACTTAGATA CTGCATCCAG TATTGAAATA
ATGAAGATAT TCCATGAACT GAACAAAGCC GGTACAACCA TAATAATGGT AACCCATGAA
CAGGACATTG CAAACCATGC AAAGAGAATC ATCAGAATCA GAGATGGTAT GATAATTGAT
GATGCCCCGG TAAAAAACAG GATAACATAC TAA
 
Protein sequence
MIELKDIKKV YSLGKVELEV LKGISLKVEK GEYVAIVGPS GSGKSTLMNI IGLLDKPTSG 
SYLLDGLEVS TLNDMQLASL RNKNIGFVFQ SFNLLSKLNA LENVELPMIY AKIPPKERRQ
RALSALERVG LSDRIYHRPN ELSGGQQQRV AIARAIVMNP SFLLADEPTG NLDTASSIEI
MKIFHELNKA GTTIIMVTHE QDIANHAKRI IRIRDGMIID DAPVKNRITY