| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_2540 |
|---|
| Symbol | |
|---|
| ID | 7409410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerocellum thermophilum DSM 6725 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012034 |
|---|
| Strand | + |
|---|
| Start bp | 2658064 |
|---|
| End bp | 2659185 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643716904 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_002574381 |
|---|
| Protein GI | 222530499 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000519986 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGGAC ATATTGCAAA AAAAGGAAAG AAGTATTATA TTGTTGTGGA TATTGGTGTA
GTTGACGGAA AGCGCAAACA AAAGTGGCTG GGTGGTTTTG AAACAAAAGC CGAAGCAGAA
GAAGCTTTAC CAAGGATTCT AAACATCATC TACCAGAACA AAAATAAGCT ACTGGAGCAG
AAGACTTTTG GTGAACTTTT AGACTTATGG CTCAACACGG TAGCAAAAAA CAGGGTTTCT
CTGAGTACCT TTCAATCATA CTCTAGTTCA ATTGCACTGC ACATAAAACC TTTTCTGGGT
GATGTAGAGC TGAACAAACT GACAGCAATG GATTTACAAA AGTACTATCA GCACATCACA
GGTGAGAAGG GTCTTTCATC AACACTTGCG TTATACCACC ACCGTATAAT TCATCAGGCT
CTTGATTATG CAGTGAGAAT GAACATGATT GAAAAAAATC CAGCTGATTA TGTAGACCCA
CCGAGAAAGC GAAGTTATCA GCCTTCAATC TGGGATGAGG ATACAATTAA AAGAGCACTT
GATATTTTTC GAAACACTAA TATCTGGGTA CCTGTGCTTT TAGCAATTTA CACAGGAATG
CGGATTGGTG AGATTACTGC ACTGAAGTGG GATGACATAA ATTTAGAGCA GGGCTATATA
GTTGTTAGCA AGACACTTAT GAAGATAAAC AGGCAGTTGT ACATCAAAGA AAAGGGAGAA
AACAAAAGTA GCTACAGGAT AGTAGCAATT TCAAGCAATG TAATAGAGGA ACTCAAGCAG
TGGAGGAGAA AACAAGAGCA GTACAAAGAA AAGCTAAAGG AACTTTATCA TAATGAAGGT
TTTGTGTGCA CATTTGAAGA TGGAAGAGTA CAGGACCCAA AGTATATTAC TAAAGTATTC
CAGAAGACAA TAGAAAAGCA TGGACTGCCA AAGATACGAT TTCACGACCT CAGGCACACC
CATGCTTCAC TTCTTCTGAA ACATGGTGTA GACCCCAAGC ACATCAGTGA CAGACTGGGG
CACAGTACCA TAACCACCAC ACTCAACATT TACAGTCATG TATTTGATGA AAAGCGGCGC
AAAGTGGCAG AAACTTTTGA GGACATTTTA AAAAACCAAT AG
|
|---|
| Protein sequence | MRGHIAKKGK KYYIVVDIGV VDGKRKQKWL GGFETKAEAE EALPRILNII YQNKNKLLEQ
KTFGELLDLW LNTVAKNRVS LSTFQSYSSS IALHIKPFLG DVELNKLTAM DLQKYYQHIT
GEKGLSSTLA LYHHRIIHQA LDYAVRMNMI EKNPADYVDP PRKRSYQPSI WDEDTIKRAL
DIFRNTNIWV PVLLAIYTGM RIGEITALKW DDINLEQGYI VVSKTLMKIN RQLYIKEKGE
NKSSYRIVAI SSNVIEELKQ WRRKQEQYKE KLKELYHNEG FVCTFEDGRV QDPKYITKVF
QKTIEKHGLP KIRFHDLRHT HASLLLKHGV DPKHISDRLG HSTITTTLNI YSHVFDEKRR
KVAETFEDIL KNQ
|
|---|
| |