| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_2423 |
|---|
| Symbol | |
|---|
| ID | 7408047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerocellum thermophilum DSM 6725 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012034 |
|---|
| Strand | - |
|---|
| Start bp | 2569470 |
|---|
| End bp | 2570102 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643716786 |
|---|
| Product | putative RNA polymerase, sigma 70 family subunit |
|---|
| Protein accession | YP_002574264 |
|---|
| Protein GI | 222530382 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0647995 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGTTTG CAATGTTTGA GCTGAGTTTC GATGAACAAA AAGAATTGAT TGGCAGAATA
AAGAAAGGGG ACAAAGAAGC CGCTGAAACA CTTATTATGG CATATGAGCC TTTAATTATA
TCACTTGCCG CTAAATACAA CAAACCCGAC ATCTTTGAAG ACTTGAAGCA GGAAGGTGCA
GTAGCAATCC TGCAGGCTGC CCAAAAGTTT GATGAGAGCT TGGGCGTCTC GTTTGTAACC
CTCGCAATAT ACTATATCAA ACGCAATATG GACAGATGTA CCAACAAAAG CAGAACAATA
AGACCACCGT TTAATAAACC CAATACTGAA ATCCCGCAGG TGATTTCAAT GGAATCTGTT
ATTAATACTA ACAGTCATGC TGATGATGAA GAGCTAAAAG TTAAGGACAC TGTTCAAGAT
ACTGCTAATG TTGAAGAGCA AGCAATGTAC AATGAAACTC TGCAAAGACT TATTAAAATG
CTTTCAGACG AAGAAAGGAA AATTCTGTTA CTGCGACTCA AACAATACAG CTTCAAGGAA
ATTGCAAAGG AGTTAGGACT GACTGAAAAG CAAGTTGCTA CAAGAGCACA AAAAATCCGT
ACTAAACTCC AGTGTCTCCT GAAAGCATCG TAG
|
|---|
| Protein sequence | MKFAMFELSF DEQKELIGRI KKGDKEAAET LIMAYEPLII SLAAKYNKPD IFEDLKQEGA
VAILQAAQKF DESLGVSFVT LAIYYIKRNM DRCTNKSRTI RPPFNKPNTE IPQVISMESV
INTNSHADDE ELKVKDTVQD TANVEEQAMY NETLQRLIKM LSDEERKILL LRLKQYSFKE
IAKELGLTEK QVATRAQKIR TKLQCLLKAS
|
|---|
| |