Gene Athe_2388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_2388 
Symbol 
ID7408855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand- 
Start bp2539190 
End bp2540161 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content40% 
IMG OID643716751 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 
Protein accessionYP_002574230 
Protein GI222530348 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.00285003 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATAC TTGTAACAAG AAGAATAATG GAACCTGCGA TTGAGCTTTT GAAAAAATAT 
GGTGAGGTTG AAGTAAATCC ACACGACAGA CCAATGACAA GAGAAGAACT TCTGTCAGCA 
ATAAAAGACA AGGATGCGGT TTTAACCCAG CTTGTTGACA AGGTTGACAA AGAGTTTTTC 
GACCATGCAC CAAATGTCAA GATTGTTGCA AACTATGCAG TGGGGTACGA TAACATAGAT 
ATTGAAGAGG CAACAAGAAG AGGTGTTTAT GTCACAAACA CACCTGATGT TCTTACCAAC 
GCAACAGCTG AGCTTGCATG GGCGCTGTTG TTTGCTGCGG CAAGAAGAAT AGTTGAAGCT 
GACAAGTTCA TGAGAGGTGG ACATTACAAA GGCTGGGGAC CAATGCTGTT TTTGGGCAAA 
GGTGTGACAG GTAAAACGCT TGGTGTGATT GGTGCAGGTA GAATTGGGCA GGCTTTTGCA 
AGAATGTCAA GAGGGTTTAA TATGAAGATT TTGTACTATG ACTTTGAAAG AAAAGAAAGT 
TTTGAAAAAG AGCTTGGTGC CCAGTATGTG CCGCTTGATG AACTATTAAA AGAAGCTGAT 
TTTATTTCAA TACATGTACC TCTCACACCA CAGACAAGGC ATTTAATTGG TGAAAGAGAA 
TTTTCTCTCA TGAAACCATC GGCAATTTTA ATTAACACAG CACGTGGACC AATTGTAGAT 
GAAAAGGCTT TAGTCAAAGC GCTTAAAGAA AAGAAGATTT ATGCTGCAGG ACTTGACGTG 
TACGAGAGAG AACCTGAGTT TGAGCCAGAA CTGGCTGAGC TTGACAATGT TGTAATGCTT 
CCTCATATTG GTTCTGCAAC AGAAGAGTCG AGGCTTGACA TGGCAATGCT TGCAGCAAAC 
AATATAGTAG ATTTCATTGA AGGAAGGGTT CCAAGAACAC TTGTCAATAA AGAGGTTTTG 
AACAAGAAAT AA
 
Protein sequence
MKILVTRRIM EPAIELLKKY GEVEVNPHDR PMTREELLSA IKDKDAVLTQ LVDKVDKEFF 
DHAPNVKIVA NYAVGYDNID IEEATRRGVY VTNTPDVLTN ATAELAWALL FAAARRIVEA 
DKFMRGGHYK GWGPMLFLGK GVTGKTLGVI GAGRIGQAFA RMSRGFNMKI LYYDFERKES 
FEKELGAQYV PLDELLKEAD FISIHVPLTP QTRHLIGERE FSLMKPSAIL INTARGPIVD 
EKALVKALKE KKIYAAGLDV YEREPEFEPE LAELDNVVML PHIGSATEES RLDMAMLAAN 
NIVDFIEGRV PRTLVNKEVL NKK