Gene Athe_2343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_2343 
Symbol 
ID7407762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp2487293 
End bp2488279 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content40% 
IMG OID643716707 
ProductTIM-barrel protein, nifR3 family 
Protein accessionYP_002574186 
Protein GI222530304 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0042] tRNA-dihydrouridine synthase 
TIGRFAM ID[TIGR00737] putative TIM-barrel protein, nifR3 family
[TIGR00742] tRNA dihydrouridine synthase A 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGACA TCAAAGGGAA AATTTTCTTA GCACCCATGG CAGGGTTTAC AGACAAGGTT 
TTCAGAAGGC TTTGCTCAAG ATTTGGAGCA GATGTTACAG TGACAGAGAT GATATCAAGC
AAAGCACTTG TCCTTGGCAG CGCAAAAACA AAAGATCTTA TTTCATTTTC AGAGGAAGAG
AAGATAAGAG GTGTTCAAAT TTTTGGTAAC GACCCTGAAG TTATGGCACA GTCTGTAAAG
ATATTGCAGG ATGAGTTTGA ATACCATTTT ATTGACATAA ACATGGGCTG TCCTGTTCCG
AAACTTGTGA GAAGCGGAGA AGGATGTGCC CTGATGAAAA ACCCTTCTTT GGCTGCGAAG
ATAGTCGAAG AGGTTGCAAA GGTAAGTAGA AAACCTGTAT CTGTCAAAAT TCGAAAGGGA
TTTGATGATG AAAATATTAA TGCTCCTGAA TTTGCGTACA TCCTGCAAGA AAGCGGAGCC
TCTTTTGTGA CAGTTCATGG AAGAACAAGG GCTCAGCTGT ACTCTGGGAA AGCTGACTGG
GAGATAATCA GAAAGGTAAA AGAAAAGCTC AAAATTCCGG TTATTGCGAA CGGAGATATA
GTAGATTTTG AGTCGGCGAA AAAAGCGTAT GAAGTAACAA GAGCTGATAG TATCATGATA
GGAAGAGCGG CGCTTGGGAA CCCTTGGGTG TTTCTTCAGA TCAAAGAAGG GTTTGAAAAG
GGGTATGTTG AAACTAAGGT TTTACCTCAT ATGAAGATAA GGGTTGCGAT TGAGTTTTTC
ACGCAGCTTT GCAGTGAAAA AGGCGATAAG ATGGCAGTCT TGGAAGCAAG AAAGCACCTT
AGTTTTTTTG TAAAAGGAAT TGAGAATGCC GCTAAGATAA GAGATAAAAT TAACAGAATA
AATAATGCTA CAGAGCTTTT AGAGTTTCTT AAAGAGCTTG CATCTTCTCT TGAGAAAAAA
GAAAGCTTTG TCGATAATAT CTTATAG
 
Protein sequence
MLDIKGKIFL APMAGFTDKV FRRLCSRFGA DVTVTEMISS KALVLGSAKT KDLISFSEEE 
KIRGVQIFGN DPEVMAQSVK ILQDEFEYHF IDINMGCPVP KLVRSGEGCA LMKNPSLAAK
IVEEVAKVSR KPVSVKIRKG FDDENINAPE FAYILQESGA SFVTVHGRTR AQLYSGKADW
EIIRKVKEKL KIPVIANGDI VDFESAKKAY EVTRADSIMI GRAALGNPWV FLQIKEGFEK
GYVETKVLPH MKIRVAIEFF TQLCSEKGDK MAVLEARKHL SFFVKGIENA AKIRDKINRI
NNATELLEFL KELASSLEKK ESFVDNIL