| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_2197 |
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| Symbol | |
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| ID | 7408393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaerocellum thermophilum DSM 6725 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012034 |
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| Strand | - |
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| Start bp | 2324596 |
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| End bp | 2325783 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 643716565 |
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| Product | tRNA pseudouridine synthase D TruD |
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| Protein accession | YP_002574045 |
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| Protein GI | 222530163 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000286837 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTGGATTT TAAAGGGTGA TAGTAGTTTG AAGATTAAGG TTTTACCAGA GGATTTTGTT
GTGAGAGAAA AACTTAAGAT TGAAATAAAA CCGTCGGGCA AATACAAAAT TTATCTTTTA
ACAAAAAGGC ACTGGAACAC TGTTGATGCT CTCAGGTTCA TTTCAAAAGA AAACAAGATT
CCACTTGAGA AGATTGGCTG TGCTGGGAGA AAAGATAGAC ACGCACTCAC TTTTCAGTAT
ATTTCTGTGC CAAGAGAATA TACCATAAAT TTTAACAAAG AAAATGTAAA GGCTCAGTTC
ATAGGGTATT CAGATGATTT TGTATCTCCT TTAATTCTCG AAGGAAATTT TTTTGAAATA
ACAATAAGAA AATTAAAAAA TAAGGATGAA AAAATTTTAC AAAGACTGAA CGAAGTACAG
CAGTTTGGTT TTCCCAACTA CTTTGATGAC CAGCGGTTTG GAAGCATCCA AAATGAAGAT
GAGTTCATAG GCGAAAAGAT TGTTAAAAAA CATTACAACG GTGCTCTCAA ACTTTATTTT
ACAACCATTC ATCCTGAAGA TAAAAAAGAA GAAAAGGAGA GGAAGAAAAA AATTTCTGAG
CTTTGGGGAG ATTTCGAAAA GATACTGCCT CTTTGTAAAA CGAAGGTAGA AAAGAATATT
ATAAAAACTC TCCTTAAAGG CAAGAGCAGA CACTATTTAA TTAGAGCGCT CAATCTTATT
TCCAAAGAAG AGATGTCTAT TTTTCTTTCT GCTTATCAGA GCTATATATG GAACAGGACA
TTGATTGCAG TTTTGCCCTA TTATGTTGAT TTGTTAAAAC CTGTAAAGGG GAAAATTATG
GACTATTTAA TTTACCCTAT ACTTTCAACA AAGTCTTTAA ATAACTTAAA AAACCTTCAG
ATTCCAACCG TCTCATCAAA AATACCATAT GTGAGTGATA TTGTAAATAA CGCTATTTTA
GAGATTTTAA ATGAAAGAGG AGTAAAGCCT TCTGATTTTG ATACCAAAAA GATCAGGAGC
TGGTATTTTA AATCGTTTTT AAGACCTGCC ATAGTCTTTC CAGAAAAGCT TGAAGTGTTC
GACTTTGAAG AAGATGACTT TTATGAAGGG TATTATAAGC TTAGGATAAA ATTCTATCTT
CCTGCAGGTT CTTTTGCGAC CATGCTTATG AAAAGTTTAA CTGTTTAA
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| Protein sequence | MWILKGDSSL KIKVLPEDFV VREKLKIEIK PSGKYKIYLL TKRHWNTVDA LRFISKENKI
PLEKIGCAGR KDRHALTFQY ISVPREYTIN FNKENVKAQF IGYSDDFVSP LILEGNFFEI
TIRKLKNKDE KILQRLNEVQ QFGFPNYFDD QRFGSIQNED EFIGEKIVKK HYNGALKLYF
TTIHPEDKKE EKERKKKISE LWGDFEKILP LCKTKVEKNI IKTLLKGKSR HYLIRALNLI
SKEEMSIFLS AYQSYIWNRT LIAVLPYYVD LLKPVKGKIM DYLIYPILST KSLNNLKNLQ
IPTVSSKIPY VSDIVNNAIL EILNERGVKP SDFDTKKIRS WYFKSFLRPA IVFPEKLEVF
DFEEDDFYEG YYKLRIKFYL PAGSFATMLM KSLTV
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