Gene Athe_2171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_2171 
Symbol 
ID7408364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp2299914 
End bp2300669 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content34% 
IMG OID643716536 
ProductH+-transporting two-sector ATPase, E subunit 
Protein accessionYP_002574019 
Protein GI222530137 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1317] Flagellar biosynthesis/type III secretory pathway protein 
TIGRFAM ID[TIGR02499] type III secretion apparatus protein, HrpE/YscL family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCTAATG TTATCAGAAA TAACCAGGTA CTGATTCAAA ATCCAGTTGA AACAAACTAC 
AAAGTGCTTC TCGAAAAGCT TATAAAGGCA AAGGCTGAGA TTGAGCACTA TGAAAGAAGA
TTAAAAGAGC AGGAAGAAGA GTTTGAAAAG CAAAAAAATA GAGCCGAGGT TCTTCAAAAA
GAAGCTGAAG AGGTTTTAAA AAAAGCAAAG GAAGAAGCAC AGAGAATAGT AGATGAAGCA
AATGTTCGTG CACAGCTAAT TTTGCAGCAG GCACAGGAAG ATGGTTACAG AGAAGGGTTT
GAAAAGGGTT TACTTGATGC TCAAAAAGAG TATGAAAAGA TGCTTGAGGA TATAGAAATT
CAAAAGGCAA TGATATTAAA AGAAAGAGAG AATATACTCA AAGACCTTGA GACCAAGGTT
TTGCTCCTTG TACCTCAGAT TTTAGAAAAG GTATTGGAAA GGGAGATAAA AGATAAAAGC
TTTTTACAGC AGTATATTAA AAATGCTATT TTACAACTTT CTATTCGAAA TAATTTAACT
TTAAGAGTTA GCGAGGAAGA TTTTGAATAC GTAAATAGTA AACTTGATGA GATTTTACGG
AGGATTGACG GGATTGACAA AGTAGATGTG AAAGTTGACA AAGCCTTGAG AAGTGGTGAT
GTAGTGGTTG AAACTCCATA TGGTTTTGTC GAAACAGGTG TAAAGATGAG ACTTGAAAAG
ATACAGGAAA TAGTTTTATC TTTGATTGGT GATTGA
 
Protein sequence
MSNVIRNNQV LIQNPVETNY KVLLEKLIKA KAEIEHYERR LKEQEEEFEK QKNRAEVLQK 
EAEEVLKKAK EEAQRIVDEA NVRAQLILQQ AQEDGYREGF EKGLLDAQKE YEKMLEDIEI
QKAMILKERE NILKDLETKV LLLVPQILEK VLEREIKDKS FLQQYIKNAI LQLSIRNNLT
LRVSEEDFEY VNSKLDEILR RIDGIDKVDV KVDKALRSGD VVVETPYGFV ETGVKMRLEK
IQEIVLSLIG D