Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Athe_2144 |
Symbol | |
ID | 7408853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerocellum thermophilum DSM 6725 |
Kingdom | Bacteria |
Replicon accession | NC_012034 |
Strand | - |
Start bp | 2277149 |
End bp | 2277889 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643716509 |
Product | RNA polymerase, sigma 28 subunit, FliA/WhiG |
Protein accession | YP_002573992 |
Protein GI | 222530110 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000102302 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGATG CACTTTTGTG GGAAAAGTTT ACAAAGACAA AAGACCCTAA AATAAAAGAA CAACTTATAA TAAAATACAT GCCACTTGTA AAGCTTGTGG CTGGCAGGAT GGCCATTTAT TTTGGTGGTA ATGTTGAGTA TGATGACTTG GTAAGTTATG GTTCAATTGG TCTTCTTGAT GCAATCGAAA AGTTTGATAG TCAAAAAGGA GTCAAATTTG AGACGTATGC ATATACAAGA ATAAAAGGAG CAATAATTGA CTGTGTTAGA AGCCAGGACT TTTTGCCACG AAGCATTCGA CAGAAAGCAA AAGAGATAGA AAGGGTTTAC ATTGAGATAG AAAAAGAAGG TAAAACCCCG ACAAATCAAG AAGTTGCTAA GAGAATTGGA ATTTCTGTAG AGGAACTTCA GAAACTGCAA GACAGGATAT CCAGTGGGAT GATTATTTCA CTGGAAAGTT TTTTAGAACA AAATTATGAA AGCAAAATTG GCGGGCTTGA AGATTTTGTG TCCCAGCCAG AACATTTTAT AGAGAATGAA GAGCTTAGAG AAGTGTTGAG GCAGCAGATA GATAATCTTT TGGAGAATGA AAGGATGGTG ATAGTACTTT ATTACTATGA AGAACTTAGC ATAAAAGAGA TAGCAAAAGT TCTGGGCGTA TCTGAATCAC GTGTAAGTCA GCTTCACACG CGAGCGCTTT TAAAACTCAG AAGTGCATTA CAAAAGTATT TGGAAAAATA A
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Protein sequence | MDDALLWEKF TKTKDPKIKE QLIIKYMPLV KLVAGRMAIY FGGNVEYDDL VSYGSIGLLD AIEKFDSQKG VKFETYAYTR IKGAIIDCVR SQDFLPRSIR QKAKEIERVY IEIEKEGKTP TNQEVAKRIG ISVEELQKLQ DRISSGMIIS LESFLEQNYE SKIGGLEDFV SQPEHFIENE ELREVLRQQI DNLLENERMV IVLYYYEELS IKEIAKVLGV SESRVSQLHT RALLKLRSAL QKYLEK
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