| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_2110 |
|---|
| Symbol | |
|---|
| ID | 7408819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerocellum thermophilum DSM 6725 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012034 |
|---|
| Strand | - |
|---|
| Start bp | 2238688 |
|---|
| End bp | 2240226 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643716476 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_002573959 |
|---|
| Protein GI | 222530077 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01765] transposase, putative, N-terminal domain
[TIGR01766] transposase, IS605 OrfB family, central region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.228237 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAACAG TTCAGGCGAA GTTAGTGTTC GATAGAGAGG AAGACAAAAA GGCAGTATTA
GATCTTATGA GAAGATGGTC CTCTTGTATG AGGTATGCAT ATAAGAGACT ACTGGAAAGG
CATAAAAGGA ATGAACTCAA AAGAGAGCTG CAAGGAATTT TTAATCTTAA TTCCCGATAC
GTTGATGATG CAATAATGAA AGCAAACAGT GTTTTAAACT TATGCAAAGG AAGAGGAGAA
AATCCTGAAA AGGTCATTTT TGGTGGTAGG CAACTTTTTG AAAAACTAAA GAGGCGGCAC
ATAAACGGCA AGGTATATAG GAAACTTCAA CGAGAGTGGC AGGAGAAGAG GAAGGGGAAT
CTGTACTCAA GAGGAGACAG GAGCAAGAAA GGTAATCTCA ATACAAGGAT TGAGATAGAC
GGGAACTTCA CAAAACTCAG GATTAACGTA GGAAAAAGAG AGTACGTATA TGCGACGATA
CAAGCTGGAT GGAAGATGAA AGGTAAGACA TACATGGATA GGAACCTACT GCTACAAGCA
ATAAGCAGCT TTAGTGGACC TTATTCTGTA GAACTGAAAC TCAAAAACGG TGTAGTATAT
GCCTACTTCA CCGTTGAAGA AGTTTTCCCC AAGCCTGCGA TAACGAGAGC AAATGGAGTT
ATAGGGATAG ACACTAACGC ATATCCAAAG AATGTTGCAT GGGCAGAAAC AGATGAGTAC
GGACAGTTTC TAGGATATGG CAGAATACCA CTTGAGAAGC TTGAGAGTGG AAGCTCAAGC
AAGAGAGAGT ATTACAGGTG GCAGTATGCA CACATGATAG TACAAATGGC GAAAGAGAAG
CAAAAAGCGA TAGTGATTGA GAACCTTAGC ATACAGGACA GGGGCAGAAG AGGCGACTTT
TCAGGTAGAA AATCAAGACG GATAAGGCAC TATTTTGGAA GCAGATTACT TTTGGAGAAG
GTAAAACTTC TGGCAAAACG GGAAGGAGTA GAGGTTATAG AAGTAGACCC GGCGTATACT
TCTGTGATAG GGATGTTGAA GTATGCACCG CAGTATATGG TGAGCAAGGA TATTGCGGCA
GCGTATGTAA TAGCGCGAAG AGGACTTGGT TTGAGAGAAA GGATACCGCA CAATTATATG
CTGCTTCTTA GTAGGCTTGA TGTAAACAAC CTGGAAGAGC TAAAAGAGTA TGTAAGGAAG
GTAGTCAAGA ACAAACATCT GAGGAAAAAA CAACTCAAAA CGATAGATAG AGCGATAAAG
TTTTTACAAA GCTCTGGGAG TGAGCCAGGG AGGCTATCCG TGCCTCTGGA TGGAACAAGC
GCGGGTAGTC GTGGCAAAAA ACACAATCCC TGGCGAGTTC TCAGGGTAGC GGTGGTAACG
CCACTCTCCC CTGACAGAGT CCTGCGTGAT ATGTCTGTCT TGAAATCGCT TTTGATTTCA
GGGCAAGTGG GGAAGACCTG TAAGGGCGTA AGTTCCTGTT TCTTGGGGCA GGGGCTATGG
CTTTCCCAAA TACCGCCTGC TGGGGCTGGG AAAGCCTGA
|
|---|
| Protein sequence | MVTVQAKLVF DREEDKKAVL DLMRRWSSCM RYAYKRLLER HKRNELKREL QGIFNLNSRY
VDDAIMKANS VLNLCKGRGE NPEKVIFGGR QLFEKLKRRH INGKVYRKLQ REWQEKRKGN
LYSRGDRSKK GNLNTRIEID GNFTKLRINV GKREYVYATI QAGWKMKGKT YMDRNLLLQA
ISSFSGPYSV ELKLKNGVVY AYFTVEEVFP KPAITRANGV IGIDTNAYPK NVAWAETDEY
GQFLGYGRIP LEKLESGSSS KREYYRWQYA HMIVQMAKEK QKAIVIENLS IQDRGRRGDF
SGRKSRRIRH YFGSRLLLEK VKLLAKREGV EVIEVDPAYT SVIGMLKYAP QYMVSKDIAA
AYVIARRGLG LRERIPHNYM LLLSRLDVNN LEELKEYVRK VVKNKHLRKK QLKTIDRAIK
FLQSSGSEPG RLSVPLDGTS AGSRGKKHNP WRVLRVAVVT PLSPDRVLRD MSVLKSLLIS
GQVGKTCKGV SSCFLGQGLW LSQIPPAGAG KA
|
|---|
| |