| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_2108 |
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| Symbol | |
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| ID | 7408817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaerocellum thermophilum DSM 6725 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012034 |
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| Strand | - |
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| Start bp | 2235879 |
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| End bp | 2238029 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643716474 |
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| Product | ribonuclease R |
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| Protein accession | YP_002573957 |
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| Protein GI | 222530075 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0218671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAAAA TTAAATTTGA AGAGAAAAAA CAGGAGGTTT TAAATCTTTT TCAGGAAGAA
AGTTATCATC CCATGACCTT TTCAGAAATC CTTGAGATTT TGAACTGGCA AGAAAAAGAT
GAAAAGCTTC TCAGGAAGAT ATTAGAAGAA TTAGAACAAG AGGGCAAGAT TGTAAAGACG
AAGCGTGGCA GGTTTGGTCT TGCCGAAGAG ATGAACTTGT TTGCTGGAGT GCTTGAGGTA
AATCCGCGCG GCTATGGTTT TCTGATTCCT GACAATCCAA ATGTTCCAGA TATTTATATT
TCACCTGAGA ACATGAATGG TGCTATGCAT GGAGACAGAG TGCTTGTCAA GGCACTTTCT
GCTGTTCCTG TTGAGGGTAA AAAAATTGAA GGATATGTTG AGAGAATTTT ACAAAGGAGT
ATTACAAAAG TTGTTGGAAG GTATGAGGAT AGCAAAAACT TTGGTTTTGT TATTCCAGAT
GACCAGAGGA TAACATATGA TATCTATATT CCAAAGAGCG GTAAGAATAA AGCAAAGACA
GGTCAGAAGG TTGTTGTTGA GATTACAAGG TATCCTGAAA AAAGAAGAAA TCCTGAAGGG
AAAATTGTTG AGATTTTGGG GTATGAAAAT GCCAAAGGTG TTGACATTCT CTCAATAATC
AAGAAATATG AACTTGACGA GGAATTTCCG AAAGAGGTAT TAAAAGAAGT TGAGAATATT
CCTGATGAAG TGACAGAAGA GGATTTAGAA GGAAGGGTTG ACCTGCGCAA CTTAACAATC
TTTACAATCG ATGGTGAAGA TGCAAAAGAC TTTGACGATG CAGTGTCTAT CAAAAAACTT
CCAAATGGGA ACTATCTTTT AGGTGTTCAT ATTGCAGATG TGAGCCACTA TGTAAAACCA
AACACCCATC TTGACAAGGA AGCTTACAGG CGCGGAACGT CTGTGTATCT TGTTGACAGA
GTCATCCCAA TGCTTCCGTT TAAGCTTTCA AATGGTATCT GTTCACTTAA TCCCAATGTT
GACAGGTTGA CGTTTTCAGT TATGATGGAG ATTGATAAGC AAGGAAATGT TGTAAAACAT
GATATATTTG AAAGTGTTAT AAGAAGCAAA GAGAGAATGA CCTATACAAA TGTTACAAAG
ATTCTTAAAG AAGAGGACAA GGAGCTTTTG AAAAGGTATG AACATATAAG AGAAGACTTA
GAGCTAATGC GCGAGCTTGC ACTTATCCTG CGAGAAAAGA GAATGAAAAG AGGGGCTTTG
GACTTTGATT TTGACGAGAC AAAAGTCATA CTGGACAAAA ACGGCAAACC TATAGATGTT
GTTCGATATG AGCTTACAAT CTCTAATAAA ATAATTGAAG AGTTTATGTT GATTTGTAAT
GAAACAGTTG CAAATCATTT TTACTGGTTA AATGTTCCGT TTTTGTACAG GGTTCATGAA
GAACCTGATA TTGAAAAGAT TTATCAATTT GCAGAGTTCA TATACAATAT GGGGTATGTT
CTAAAAGGTA TTTCAAACAA GGTACATCCC AAAGCTTTGC AGGCGGTTTT AGAGCAAAGC
CGTGGAACAC CAGAAGAAAG GGTCATTCAT ACTTTGTGTT TGAGGTCGCT AAAAAAAGCC
AGATACTGTG AAGAAAATCT TGGCCACTTT GGCCTTTCTA CAGAATACTA TTGTCACTTT
ACCTCTCCAA TTAGAAGGTA TCCTGACCTT GTCATCCACA GAATTATGAA AGATGTATTA
AAAGGTAAAA TGACAGAGAA GAAGGCTCAA AAATTAAAAC TTAAAATGCC AGAGATTGCA
AAGTGGACGT CACAGAGAGA AAGAGTTGCA GAAGAAGCAG AAAGGGAAAC AATTGACCTC
AAGAAGGTTG AATTTATGCA GGACAAGATT GGTCAGGTCT TTGAAGGAAT TATTTCGAAT
GTCACGCCTT TTGGATTTTT TGTAGAGCTT GAAAATACAA TAGAAGGCCT AGTAAGAGTC
AGCACTTTAG AAGATGATTA TTATGTCTTT AATGAAAAAA CTTACCAGCT AATAGGCGAG
AAGTCCAAAA AGGTATACAA GATAGGTGAC AGGGTAAAAG TAATGCTCAT TGACGCCAAT
GTCCCGCTAA GACAAATTGA GTTTTCTGTT GTTGAGAAAC TCAAAATGTA G
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| Protein sequence | MKKIKFEEKK QEVLNLFQEE SYHPMTFSEI LEILNWQEKD EKLLRKILEE LEQEGKIVKT
KRGRFGLAEE MNLFAGVLEV NPRGYGFLIP DNPNVPDIYI SPENMNGAMH GDRVLVKALS
AVPVEGKKIE GYVERILQRS ITKVVGRYED SKNFGFVIPD DQRITYDIYI PKSGKNKAKT
GQKVVVEITR YPEKRRNPEG KIVEILGYEN AKGVDILSII KKYELDEEFP KEVLKEVENI
PDEVTEEDLE GRVDLRNLTI FTIDGEDAKD FDDAVSIKKL PNGNYLLGVH IADVSHYVKP
NTHLDKEAYR RGTSVYLVDR VIPMLPFKLS NGICSLNPNV DRLTFSVMME IDKQGNVVKH
DIFESVIRSK ERMTYTNVTK ILKEEDKELL KRYEHIREDL ELMRELALIL REKRMKRGAL
DFDFDETKVI LDKNGKPIDV VRYELTISNK IIEEFMLICN ETVANHFYWL NVPFLYRVHE
EPDIEKIYQF AEFIYNMGYV LKGISNKVHP KALQAVLEQS RGTPEERVIH TLCLRSLKKA
RYCEENLGHF GLSTEYYCHF TSPIRRYPDL VIHRIMKDVL KGKMTEKKAQ KLKLKMPEIA
KWTSQRERVA EEAERETIDL KKVEFMQDKI GQVFEGIISN VTPFGFFVEL ENTIEGLVRV
STLEDDYYVF NEKTYQLIGE KSKKVYKIGD RVKVMLIDAN VPLRQIEFSV VEKLKM
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