Gene Athe_2087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_2087 
Symbol 
ID7408796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp2210868 
End bp2212070 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content33% 
IMG OID643716454 
ProductIntegrase catalytic region 
Protein accessionYP_002573937 
Protein GI222530055 
COG category[L] Replication, recombination and repair 
COG ID[COG4584] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.347453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAACT TAACAGCACA TTTAAACATG ATAAGGGCGA TGAAAATGAA ACCTAACTTT 
TCAGAACTTG CAAGAATATA TGGGATGGAT AGAAGAACAG TTAAAAAATA TTATGAGGGT
TATGAAGGAA AACCTAAGAA TAGAAATAAA CCAAGTAAAT TGGACAAATA CTATGATGAG
ATAAAATCAA AGCTTGCTAT CAAAGGAGTT ACAGTCAAGG GTGTTTATGA GTATTTAAAA
TCAAAAGATG AGACAATAGG AACATATTCA AACTTCAATA AGTATGTTAA GAAAAAAGGA
TTAAAGCCAG AGAAGAAAAT AAAAGGTCAC CCAAGATTTG AGACAGATCC AGGTGAGCAA
GCGCAAGTTG ATTGGAAAGA GAATATAAAG CTTGTCTCAA GAAATGGAGA GGAGTTTATC
ATTAATGTTC TTGATTTTAA ATTAGGTTAT TCAAGGTATT GCTGCTTTGA GATAAACAGG
ACAAAAACTC AAGAAGAATT AATAGAAACT CTAATAAGAA TATTCAAAGA TATAGGCGGA
GTACCGAGAG AGATTTTATT TGACAATACA GCAGCAGTTG TTGATATAAC AGGTGAGAAA
ATTAAAGTAA ATTCAAGATT TAAAAGTTTT GCAAAAGACT TTGGGTTTGA AGTAAAACTG
TGCAAACCAA GACATTCGTA CACAAAAGGA AAAGTTGAAG CAGCAAACAA GTTTATAGAT
TGGATACTGC CATATCAGGG TGAATTTGAA ACAGAAGAGG ACTTAGTAAG GATAATAAAA
GAGATAAACG CAAAGGTCAA TATGCAGCCA AATCAAACAA CTCAAGTTCC ACCTGCTCTT
CTGTTTCAAA AAGAAAAAGA GTATTTACAA CCCTTGCCAG ACAAAAGGTT AATAGACAGT
TACCTAAATT CCTACAAGTC AGTTAAAGTC CAAAAGGACT CTCTGATTTA CTACAAGGGA
AGTAAATACT CTGTTCCACC CGAATACATA GGAAAGACAG TCCAAGTAAA GGAGGTGGAA
AACAAAATTT ATATTTATTA TAACACAAAC CTGTTAAGGA TACATGTTAT TGATGAAAAA
AATATCAATT ATCACGATGA AGATTACAAG CAGCTAATGC TAATGAGAGT TGGTCAAAGA
GAAGAGCTTA ACAAGATATG TGAGGAAAAC CTAAAGAAAT TTGATAATCT GTTGAAAACC
TAA
 
Protein sequence
MQNLTAHLNM IRAMKMKPNF SELARIYGMD RRTVKKYYEG YEGKPKNRNK PSKLDKYYDE 
IKSKLAIKGV TVKGVYEYLK SKDETIGTYS NFNKYVKKKG LKPEKKIKGH PRFETDPGEQ
AQVDWKENIK LVSRNGEEFI INVLDFKLGY SRYCCFEINR TKTQEELIET LIRIFKDIGG
VPREILFDNT AAVVDITGEK IKVNSRFKSF AKDFGFEVKL CKPRHSYTKG KVEAANKFID
WILPYQGEFE TEEDLVRIIK EINAKVNMQP NQTTQVPPAL LFQKEKEYLQ PLPDKRLIDS
YLNSYKSVKV QKDSLIYYKG SKYSVPPEYI GKTVQVKEVE NKIYIYYNTN LLRIHVIDEK
NINYHDEDYK QLMLMRVGQR EELNKICEEN LKKFDNLLKT