Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Athe_2041 |
Symbol | |
ID | 7408254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerocellum thermophilum DSM 6725 |
Kingdom | Bacteria |
Replicon accession | NC_012034 |
Strand | - |
Start bp | 2156467 |
End bp | 2157201 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643716408 |
Product | RNA polymerase factor sigma-70 |
Protein accession | YP_002573891 |
Protein GI | 222530009 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02859] RNA polymerase sigma-H factor [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000162862 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTTGA AAGAAGCTTT AGCGATAATA TATAATTATT GTGATAGGTT TTTCTTTGAA TTCTTAACAA GGCTTAAAAA CTTAAGGAGG CATATTGCCT TGACATTACA AAAATGGCTT TTGAATTTTA AAGAATGTTC AGATGAGGAA TTGGTTAAAT ATTCAAGAGA AGGCGTGAAA GAAGCTCTTG AGGAGCTTCT TTCAAGGTAT CAAAACTTTG TGAAGGCAAA GTGCAGAATG TACTTTTTGA TTGGAGCTGA TAAGGAGGAT ATTTATCAAG AGGGTATGAT AGGTCTTTTT AAAGCTGTGC GTGATTTTGA TGAAACAAAA TATCCTTCAT TTAGATTGTT TGCAGAGATG TGCATTACAC GTCAGATGAT AACTGCAATC AAAACTGCCA GCAGGCAAAA ACATATTCCT CTTAACACCT ACATATCACT TAACAAGCCT GTGTACGAAG AAAATGACGA AAGGACGCTT ATTGATACGT TAGCGGACGC GTTCATTTCT GACCCGGAAG AGGTTATGAT TACAAAGGAG GAGCTTGAAA ACGCTATAAA TGTTATTACT GAATGTCTTT CTCCTTTTGA GTTCAAGGTT TTAAGCCTTT ACCTTGAAGG AAGGAGTTAT CAAGAGATTG CTGATATGAT TCACAAAGAT GTAAAGTCAA TTGACAATGC TCTTCAAAGG GTTAAAAAGA AGATTGAAAA GTACTTGGCT CCAGCTGATA AATGA
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Protein sequence | MSLKEALAII YNYCDRFFFE FLTRLKNLRR HIALTLQKWL LNFKECSDEE LVKYSREGVK EALEELLSRY QNFVKAKCRM YFLIGADKED IYQEGMIGLF KAVRDFDETK YPSFRLFAEM CITRQMITAI KTASRQKHIP LNTYISLNKP VYEENDERTL IDTLADAFIS DPEEVMITKE ELENAINVIT ECLSPFEFKV LSLYLEGRSY QEIADMIHKD VKSIDNALQR VKKKIEKYLA PADK
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