Gene Athe_2041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_2041 
Symbol 
ID7408254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp2156467 
End bp2157201 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content36% 
IMG OID643716408 
ProductRNA polymerase factor sigma-70 
Protein accessionYP_002573891 
Protein GI222530009 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02859] RNA polymerase sigma-H factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000162862 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTGA AAGAAGCTTT AGCGATAATA TATAATTATT GTGATAGGTT TTTCTTTGAA 
TTCTTAACAA GGCTTAAAAA CTTAAGGAGG CATATTGCCT TGACATTACA AAAATGGCTT
TTGAATTTTA AAGAATGTTC AGATGAGGAA TTGGTTAAAT ATTCAAGAGA AGGCGTGAAA
GAAGCTCTTG AGGAGCTTCT TTCAAGGTAT CAAAACTTTG TGAAGGCAAA GTGCAGAATG
TACTTTTTGA TTGGAGCTGA TAAGGAGGAT ATTTATCAAG AGGGTATGAT AGGTCTTTTT
AAAGCTGTGC GTGATTTTGA TGAAACAAAA TATCCTTCAT TTAGATTGTT TGCAGAGATG
TGCATTACAC GTCAGATGAT AACTGCAATC AAAACTGCCA GCAGGCAAAA ACATATTCCT
CTTAACACCT ACATATCACT TAACAAGCCT GTGTACGAAG AAAATGACGA AAGGACGCTT
ATTGATACGT TAGCGGACGC GTTCATTTCT GACCCGGAAG AGGTTATGAT TACAAAGGAG
GAGCTTGAAA ACGCTATAAA TGTTATTACT GAATGTCTTT CTCCTTTTGA GTTCAAGGTT
TTAAGCCTTT ACCTTGAAGG AAGGAGTTAT CAAGAGATTG CTGATATGAT TCACAAAGAT
GTAAAGTCAA TTGACAATGC TCTTCAAAGG GTTAAAAAGA AGATTGAAAA GTACTTGGCT
CCAGCTGATA AATGA
 
Protein sequence
MSLKEALAII YNYCDRFFFE FLTRLKNLRR HIALTLQKWL LNFKECSDEE LVKYSREGVK 
EALEELLSRY QNFVKAKCRM YFLIGADKED IYQEGMIGLF KAVRDFDETK YPSFRLFAEM
CITRQMITAI KTASRQKHIP LNTYISLNKP VYEENDERTL IDTLADAFIS DPEEVMITKE
ELENAINVIT ECLSPFEFKV LSLYLEGRSY QEIADMIHKD VKSIDNALQR VKKKIEKYLA
PADK