Gene Athe_2028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_2028 
Symbol 
ID7408240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp2139338 
End bp2140729 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content37% 
IMG OID643716394 
Productglycoside hydrolase family 4 
Protein accessionYP_002573878 
Protein GI222529996 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1486] Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATACCA CATCAGAACA ACAGAAACAA ATCAATATAG CATACATTGG TGGGGGCTCA 
CGCGGCTGGG CTTGGAGGTT GATGACTGAT TTAGCTTTAG AGAAGGATTT GAGTGGTACG
GTGAGACTTT ACGACATTGA TTTTGAAGCT GCTAAGACAA ATGAAGTGAT AGGCAATAAG
CTTTCAAACA AGCCTGAGGT AGTAGGGAAA TGGCAATATG TTGCTGTAAA AAGTTTGGAT
GAAGCATTAT ATGGTGCAGA TTTTGTTATC ATTTCAATTT TGCCTGGGAC ATTTGAAGAG
ATGTATTCGG ATGTCCATGC TCCTGAGAAA TATGGTATAT ACCAGTCTGT AGGTGACACA
ACAGGACCAG GTGGTCTTAT CAGAGGACTT AGGACTGTTC CTATGTATGT TGAATTTGCA
GAAGCTATAA AGAGAAATTG TCCAGATGCT TGGGTTATTA ATTACACAAA TCCAATGGCT
ATATGCTTAA AAGCTCTATA TGAGGTATTT CCTAAAATAA AAGCTTTTGG CTGCTGTCAT
GAAGTTTTTG GTACACAGAA GCTTTTGACA GAGGTTGTAA AAGAATTTTT GGGAGAAGAA
AGAGAAATCT CAAGAAGAGA AATTAAGGTG AATGTTCTTG GTATAAATCA TTTTACGTGG
TTTGACAAAG CATCATACAA AACTCATGAT TTATTCCCTC TTTACAAAGA ATTTGTGAAC
AAGTACTATG AAGAAGGTTT TGAAAAAACA AAAGGATTGT GGGAAAAAGA TTATTTTGCT
TCTGCAAATA GAGTAAAGTT TGACTTATTT AAACGCTTTG GACTTATCGC TGCAGCAGGT
GATAGACACT TGGCTGAATT TGTTCCTTAC ATTTATCTTA CAGACAAAGA GACAGTTTAT
AAATGGAAAT TTAACTTGAC GCCTGTGGAA TGGAGAATTA AGCACAGAGA AGAGTTGATT
AAACTTAGCA AAGAATACGC ATCAGACCAA AAAGAAGTTC CATTGAATCC TTCAGGTGAA
GAAGGAGTTA TGCAAATGAA AGCTATTTTA GGTTTAGATA CGCTGGTGAC AAACGTGAAT
TTGCCAAATA TGGGTCAAAT ACCAAACCTT CCAATAGGAG CTATAGTTGA GACGAATGCA
GTATTTACTC ATGATGATGT CAGACCTGTT TATGCAGGAA AGCTGCCTTC AGATTTGGCA
AGTATAATGA TTAGGCACAT CAGCAATCAG GAACTTATAG TTAAAGCAGC TTTAGAAAAG
GATTTGAACC TTGCAAAAAG AGCATTCTTA AATGACCCTG CAGTTGAAAG ACTACCGCAG
AGCAAAGCTG AGCAGCTTTT TGATGAGATG ATAAATAACA CTAAAAAGTA TTTGGCATAT
TTAGGCTTGT AA
 
Protein sequence
MNTTSEQQKQ INIAYIGGGS RGWAWRLMTD LALEKDLSGT VRLYDIDFEA AKTNEVIGNK 
LSNKPEVVGK WQYVAVKSLD EALYGADFVI ISILPGTFEE MYSDVHAPEK YGIYQSVGDT
TGPGGLIRGL RTVPMYVEFA EAIKRNCPDA WVINYTNPMA ICLKALYEVF PKIKAFGCCH
EVFGTQKLLT EVVKEFLGEE REISRREIKV NVLGINHFTW FDKASYKTHD LFPLYKEFVN
KYYEEGFEKT KGLWEKDYFA SANRVKFDLF KRFGLIAAAG DRHLAEFVPY IYLTDKETVY
KWKFNLTPVE WRIKHREELI KLSKEYASDQ KEVPLNPSGE EGVMQMKAIL GLDTLVTNVN
LPNMGQIPNL PIGAIVETNA VFTHDDVRPV YAGKLPSDLA SIMIRHISNQ ELIVKAALEK
DLNLAKRAFL NDPAVERLPQ SKAEQLFDEM INNTKKYLAY LGL