Gene Athe_1956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_1956 
Symbol 
ID7407370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp2069244 
End bp2070839 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content34% 
IMG OID643716328 
ProductGerA spore germination protein 
Protein accessionYP_002573816 
Protein GI222529934 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00462588 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGTTTA TTGAGATAAT AAAACGAAGA AAGGAAAGGG TTAGAAATAG CCAAAAGAAA 
GAGACAAAGG AATATATTTG CGCGCAGGAA AAAATTTATA TATCTATTGA TGATAACCTA
AATTATTTAA GAGAGGTACT CATTGATAAT GATGATATTG TTATAAGAGA ATTTTTTGCA
GGTGATATAA AATGTGCAAC TGTGTTTATC GATGGGCTTG TTAAAAGGGA AATTATAGAC
AGAGATGTGA TAAAGCATCT TATGGTAGAG GTACAATTAT TTGATAAAAA TATTTCTCAG
AATGAAGCCT ACAGTAAGAT ACTAAATACC CTTCTTGCTA CATCTGATAT TAAAGAGGTA
ACAAGTTTTA AAGATGCTAT TTTAGACCTT TTATGTGGAG AGACGCTACT GTTTATTGAC
AAATCTGACA AAATAATTAG AATTTCAACA CGTAATTTTC CAAATAGAGG AATTCAACAA
CCAATATCTG AAAATGCAGT AAGAGGACCT CGAGATAGTT TTAATGAGGT TGTGAGATTT
TCGACAGCTC TTATCCGAAG AAGAGTAAGA GATACAAGGC TTAGGGTAAA GAATTTAAAA
CTGGGGAGAA GGTCGAAAAC TGATGTGTAT CTTATATATG TAGATGACAT TGTGGACAGG
GAAATTTTAA ATGAGGTAAA CCAAAGACTT TCAAAAATTG ATATTGATGC AATAATGGAG
TCTGGGATGA TAGAACAACT TATAGAAGAC GACATATTTT GCTTATTCCC AACAATTCAA
CACACAGAAA GAGTTGATAC AGCAGTTGCT GCTCTTTATG AAGGAAGGAT TGTAATTTTA
ACTGACAATA CAAACTTAGC ACTTATTGTT CCCGCGACAT TTGCTACATT TATACAACAT
TCTGAGGATT ACTATGAAAG ATGGCATATT GCAACAGTTA TACGAATTTT AAGGGTTTTT
GCAGCAGTCT TAGCCATGAC ATTACAAGGG TTTTATATAT CGATATCCTC ATTTACCCCA
AGTATGATAC CACCTGACTT AGGTCTGTTT ATTGCAGCCA CAAGAGAAGG TGTGCCAATA
CCAGTATTTT TAGAGGCACT TTTTTTGGAG TTTATGCTTG AACTTCTAAG AGAAGCAGGC
TTGAGACTTC CAGGACCAAT AGGACAGACA ATAGGCATTG TAGGTGGGCT TATAATAGGA
CAAGCTGCTG TGCAAGCAGG AATTATTTCG CCTATAATGG TTATACTTGT TGCAACAACT
GCAATTGCAT CGTTTGCTAT CCCGGCATAT AATTTTTCTA TTTCCCTAAG GCTTTTTAAA
TTTGTTTATA TTCTTGTCTG CGCCGCTTTG GGACTTTATG GATTCATACT ATTGAGCTTA
ATAATTATTG GTAATTTAGT AAAAACAAAA AGTTTTGGAA TTCCATATTT ATCACCTTTT
GTCTCATTTG AGATTATGGA TTACAAGGAC GCTATTGTAA GACTTCCAAC AAGATATCTT
TGGTCAAGAC CAATATTTGC CTCAACTCAG CAAAAAATAA GGATGCTTTA TGAAAGAACC
CCAGATTATG CATCGGCAGG TGAAGATAAA AGATGA
 
Protein sequence
MGFIEIIKRR KERVRNSQKK ETKEYICAQE KIYISIDDNL NYLREVLIDN DDIVIREFFA 
GDIKCATVFI DGLVKREIID RDVIKHLMVE VQLFDKNISQ NEAYSKILNT LLATSDIKEV
TSFKDAILDL LCGETLLFID KSDKIIRIST RNFPNRGIQQ PISENAVRGP RDSFNEVVRF
STALIRRRVR DTRLRVKNLK LGRRSKTDVY LIYVDDIVDR EILNEVNQRL SKIDIDAIME
SGMIEQLIED DIFCLFPTIQ HTERVDTAVA ALYEGRIVIL TDNTNLALIV PATFATFIQH
SEDYYERWHI ATVIRILRVF AAVLAMTLQG FYISISSFTP SMIPPDLGLF IAATREGVPI
PVFLEALFLE FMLELLREAG LRLPGPIGQT IGIVGGLIIG QAAVQAGIIS PIMVILVATT
AIASFAIPAY NFSISLRLFK FVYILVCAAL GLYGFILLSL IIIGNLVKTK SFGIPYLSPF
VSFEIMDYKD AIVRLPTRYL WSRPIFASTQ QKIRMLYERT PDYASAGEDK R