Gene Athe_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_1896 
Symbol 
ID7409009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand- 
Start bp2005039 
End bp2005989 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content35% 
IMG OID643716268 
Productperiplasmic binding protein 
Protein accessionYP_002573757 
Protein GI222529875 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.00000000791854 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGATGA AGTTTTCTAA AAAGCTAATT GCAATAGTTG TTTTAATTAC ATTTGCTGTA 
GCTTTAATTC CATTTTATTC ACATGCTGCC GACTTCCCTG TCACAGTCAA GGATGGAAAA 
GGATATAGCA TAACTGTAAA GCAAAAACCT CAAAGGATTT TGTCGCTTGC GCTTCAGACA 
GATGAGATTT TGCTCAATAT GGTGTCTGCT AACAGAATTG TAGGACTTTC TATATTTGCT 
GATGACAAGA ACAATTCGAA TGTTGTGAAT CTTGCTAAGA ATGTAAAAGG CAGATATTCG 
AGCAACGACA TTGAAAAAAT AATTGCGGCA AAACCTGACC TTGTGATAGT GCCTTATTAC 
ATTGACAAGT CAAAGTACGA CCTTTTGAAG AAAGGTCTTA AGTGTCCTAT ATATGTCAGC 
TTAAATCCAA ATTCAATTGA AAATATTAAA CAGGAGATAA TAAATCTTTC AAAGCTAACT 
GGTGAAATCC AGAAAGGCCA GGCTCTTATA AAGTACATGG ACGATAAAAT AAATTTTGTC 
CAGAAAAAGG TAAAATACTT GAGAAAGAAA AAATATGTGC TTTTCTACAC ATACTACTTC 
AATTCCACAT ATGGTAAAAA TACGACTCAG CATGAGATAG CAAAATATGC AGGGGTTATA 
AATATAGCTG CTGTTGCGGG ATTGAAAGGT TGGCCAACTA TTTCAAAAGA GCAAATTTTG 
GAATGGGACC CTGACATCAT TGTTATTCCA TCTGCGTCGT ACAATCCCAA AAAGACTTCT 
CAGCAGTATG TAGAGGAGTT CAAAAAAGAC CCTGCTTTCA AAAACTTGAA AGCTGTGAAG 
AACAACAGCG TAATTATTCT TGATGATAGG CACGTTCAAA CAGTTTCGCA CTATATTGTT 
GAAGGTATTT ATGACTTAGC AAAAGCTGCA TATCCGTATC TTTTTAAATA A
 
Protein sequence
MPMKFSKKLI AIVVLITFAV ALIPFYSHAA DFPVTVKDGK GYSITVKQKP QRILSLALQT 
DEILLNMVSA NRIVGLSIFA DDKNNSNVVN LAKNVKGRYS SNDIEKIIAA KPDLVIVPYY 
IDKSKYDLLK KGLKCPIYVS LNPNSIENIK QEIINLSKLT GEIQKGQALI KYMDDKINFV 
QKKVKYLRKK KYVLFYTYYF NSTYGKNTTQ HEIAKYAGVI NIAAVAGLKG WPTISKEQIL 
EWDPDIIVIP SASYNPKKTS QQYVEEFKKD PAFKNLKAVK NNSVIILDDR HVQTVSHYIV 
EGIYDLAKAA YPYLFK