| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_1884 |
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| Symbol | |
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| ID | 7408997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaerocellum thermophilum DSM 6725 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012034 |
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| Strand | - |
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| Start bp | 1991451 |
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| End bp | 1993163 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643716256 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_002573745 |
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| Protein GI | 222529863 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000626903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCAAGTG AAAGAAAGAG AATTGGAGAT GTTTTAGTAG AGGCAAAGAT AATTACACCT
CAGCAACTGG AAGAAGCACT TAAAATTCAA AAGCAGACCA ATAAAAAATT AGGCGAGATA
CTGGTTGAGA AAGGCTATAT AACAGAAGAT GAGCTAATAG AGATTTTAGA ATTTCAGTTA
GGGATACCTC ACATAAAATT AGATGTATAT CCAATTGATC CTAAGGCTGT TGAAATGATT
TCTGAGTCAA TTGCACGAAG GCATACCGTT TTGCCAGTAA GTTTTGACGA AGATGGTAAC
TTAATTGTAG CAATGGCTGA TCCTCTCAAC ATATTTGCAA TGGAGGATAT TGAGATTTAT
TCAGGCAGAA GAGTGCGACC ACGAATTGCC AAGGCATCCG ATATTAAACG TGCAATTGAA
AGATTCTATG GTAAGCAAGA AGCTTTAAAA GCAGCTGAAG AGTTGCAAAA AGAAAGTAGC
GAAAAGGACA GCCAAGCCAA AAGAGCTACT ATTACTCCTC GATTCCAACT TGGTTTGGAA
GATGGAACTG AAGGACCTAT TGTAAGGCTT GTCAATTCGA TTTTTGAACA AGCTATTACA
TCGCGTGCAA GCGACATTCA TATTGAACCG TTTGAGAACG AGATAAAAGT GAGATACAGA
ATAGATGGTG TATTGTATGA TGTGTTGAAG TTAGATATTG GGATATTATC ATCATTGGTG
GCAAGAATTA AAATTATAGG TAATATGGAC ATTGCGGAAA AGAGAATACC CCAGGATGGG
CGAACGACTT ACATTTTTTC GGATAAAATA TATGACATGA GAATCTCCTC TTTACCATGT
GTTTATGGTG AAAAGATAGT TGTGCGTGTA ATAGACAAAA GTGCATTTGT GCGTTCTAAA
GCTGAGCTTG GCTTGACTGA AGAGGACGAA GAGAAATTTA ACAAGCTGAT TGCTGCGCCA
CATGGAATAA TCTTGGTATG TGGTCCTACC GGTAGTGGTA AATCTACTAC GCTTTATACT
ATTTTAAACG AACTTAATAC AGGAACACGC AACATAATAA CTGTTGAGGA TCCTGTCGAA
AGTACCATAG AAGGTATTAA TCAAGTAGAG GTCAATACCA AAGCAGGGCT AACATTTGCA
GCGGCGCTGA GATCAATCTT GCGACAGGAC CCAGATATAA TTATGATTGG TGAGATCCGA
GACAGAGAGA CAGCTGACAT GGCAATCAGG GCTGCTATTA CAGGACATTT AGTGTTGTCA
ACCATTCATA CAAATGATGC AGCAAGTGCA ATTACAAGGT TGGTTGACAT GGGGATAGAA
AACTTTTTGA TAAGCTCGTC GTTGGTAGGG GTAATATCAC AGAGATTGGT AAGAAAACTG
TGTTCATATT GTAAAGAGCC TTATGAGCCA TCAGAGGAAG AAAAAATTCT TCTTGACATA
AAGCAAGATG AGAATGTAAA ATTATACAGA AAGAGAGGAT GTCATATATG TGATAGAAAA
GGTTACTATG GTAGAACAGG TGTATATGAA ATTCTGATTG TGACAAAAGA GTTGAGAAAA
CTTATAAACA AAAAAGATGT CAGCAGTGAG GAAATAAAGG AACTTGCTGT CAAACAGGGG
ATGAAGACAC TGCGACAAGC TTGCAGAGAG AGAGTTTTGA ATGGAATTAC ATCAGTTGAA
GAATATCTGA AGATTACTTA CGCACTTGAA TAG
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| Protein sequence | MPSERKRIGD VLVEAKIITP QQLEEALKIQ KQTNKKLGEI LVEKGYITED ELIEILEFQL
GIPHIKLDVY PIDPKAVEMI SESIARRHTV LPVSFDEDGN LIVAMADPLN IFAMEDIEIY
SGRRVRPRIA KASDIKRAIE RFYGKQEALK AAEELQKESS EKDSQAKRAT ITPRFQLGLE
DGTEGPIVRL VNSIFEQAIT SRASDIHIEP FENEIKVRYR IDGVLYDVLK LDIGILSSLV
ARIKIIGNMD IAEKRIPQDG RTTYIFSDKI YDMRISSLPC VYGEKIVVRV IDKSAFVRSK
AELGLTEEDE EKFNKLIAAP HGIILVCGPT GSGKSTTLYT ILNELNTGTR NIITVEDPVE
STIEGINQVE VNTKAGLTFA AALRSILRQD PDIIMIGEIR DRETADMAIR AAITGHLVLS
TIHTNDAASA ITRLVDMGIE NFLISSSLVG VISQRLVRKL CSYCKEPYEP SEEEKILLDI
KQDENVKLYR KRGCHICDRK GYYGRTGVYE ILIVTKELRK LINKKDVSSE EIKELAVKQG
MKTLRQACRE RVLNGITSVE EYLKITYALE
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