Gene Athe_1829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_1829 
Symbol 
ID7408943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp1903840 
End bp1904742 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content29% 
IMG OID643716206 
Productpolysaccharide deacetylase 
Protein accessionYP_002573695 
Protein GI222529813 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000043926 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACCTCA AAAAGTTAGT ATTTGTAACC TCTTTGATAG TTTTGGCGTT ATTTTCCTTC 
TTCTTATCCA TGCATATTAG CAAAAACTTT TTCTCAGCTA TAATTTTAAA ACAAAATCAC
ACCTACATTC AAGAAGAGAA ACTTAAGATT TTTGAAAAAC CAAAACCTTC ACATAATCAA
AATTCAGCCA ATCTCAGTCT AAATAAAAAT GGTAAAAGTA AAAATCTTCT TCATACTCAA
AATAAAGATG TACAAGTTGA AAAGCAGGAA AAAAATGAAA AAATTATTTA TCTTACTATT
GATGACGGTC CATCACCTGT CACCCCTTCT ATACTCGAAA TTTTGGAAAA GGAAAAAGTT
AAAGCTACAT TTTTTGTTGT AGGTGTAAAC TGTATAAAAT ATCCTCAATA CTTAAAAGAA
ATTTATCAGA AAGGCCATTT GATAGGAAAT CATTCATATT CTCATCAGTA TAATAGCATA
TATAAAGATT TTAAACATTT TGTTGAGGAC TTCAAAAAGG CACAAGCTAC TATATATAAA
ATTATAGGAG TAGAACCCAA ATATTATAGA TTTCCTGGGG GCTCTTTAAG CAGAGTTTCA
CCACAAATTA AAAAATTTCT TGATGCAAAT GGTATAGTAT ATATCGATTG GAACGCAATT
ACTGGCGACT CAATAAAAAA TCATGAAAAT CTTACACCAA ATCAAATCTT AAAAATTACA
ACTTCAACAG CTAATAAAAA AAATGAAGTT GTACTTTTAA TGCATGACAG TTCTTCTAAA
AAGAATGTAA TAGAAGCTCT GCCAAGTATA ATCAGAACTT TCAAAAAACA AGGATACAGA
TTTGAAACAA TTGACAGGAT ACAAAAACCC ATTCAGTTTA AAACAAAAGC CGCATCACAT
TGA
 
Protein sequence
MNLKKLVFVT SLIVLALFSF FLSMHISKNF FSAIILKQNH TYIQEEKLKI FEKPKPSHNQ 
NSANLSLNKN GKSKNLLHTQ NKDVQVEKQE KNEKIIYLTI DDGPSPVTPS ILEILEKEKV
KATFFVVGVN CIKYPQYLKE IYQKGHLIGN HSYSHQYNSI YKDFKHFVED FKKAQATIYK
IIGVEPKYYR FPGGSLSRVS PQIKKFLDAN GIVYIDWNAI TGDSIKNHEN LTPNQILKIT
TSTANKKNEV VLLMHDSSSK KNVIEALPSI IRTFKKQGYR FETIDRIQKP IQFKTKAASH