Gene Athe_1786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_1786 
Symbol 
ID7408573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp1860146 
End bp1861021 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content36% 
IMG OID643716163 
Producttyrosine recombinase XerD 
Protein accessionYP_002573652 
Protein GI222529770 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID[TIGR02225] tyrosine recombinase XerD 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0596225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATCA TAGAAGCGTT TGGTAATTAC CTCCAGAGAC AGAATAGATT TTCACAGAAT 
ACTATAAGTT CGTATTTACG GGACGCTAAA AAATACATAG AGTTTTTAGA TGACATAAAA
ATAAAACTTG AAAATACTTC TCAGACAACA TTGATAGCAT ACATTATCAG TATGCAAAAA
GGTGGTAAAT CAAACAGTAC TATTGCACGT GCAATTGTTT CACTAAAAGT CTTTTATGAA
TTTCTAAAAA TTCAGGATAT TGTTGATATT GGAAAGATTG AGATTGAACC TCCAAAACTT
GAAAAAAGTC CACCTCAGAT ACTTACAAGA GATGAGGTGG AAAGGCTTCT TTCATGTCCG
AAAGAGGATG ATATTAAAGG AATCAGAGAT AAAGCAATGC TTGAGCTTTT GTATGCAACA
GGTATCAGGG TAAGCGAGCT TATAAATCTC AATCTTGACG ACATCAATCT TGAACACGGA
TATATTATTT GCAAAAACAA GAAAAGAGAC AGAGTTATTC CCATTGGTTC ATATGCCATT
TCGGCAGTGG AGAAGTATTT GCGTCATTCA CGACCTTACC TTGCAAAAAG TAAAGATGAA
GAAGCTCTTT TTTTGAACTT TAGCGGTGAA AGAATGACAA GACAGGGATT TTGGAAGATA
GTAAAGTTTT ATGCACAAAA TGCAAAGATA GATAAAGAAA TAACACCGCA TGTGCTCAGA
CACTCTTTTG CCACTCATCT AATTGAAAAT GGTGCGGATG TGAGAGCTGT TCAGCAAATG
CTTGGCCATG CTGATATTTC CACAACACAG AGATACCTTC AAGTTGCAAA TGTTAAGCTA
AAAGAGGTGT ATCAAAAAAC CCATCCACGT GCATAA
 
Protein sequence
MSIIEAFGNY LQRQNRFSQN TISSYLRDAK KYIEFLDDIK IKLENTSQTT LIAYIISMQK 
GGKSNSTIAR AIVSLKVFYE FLKIQDIVDI GKIEIEPPKL EKSPPQILTR DEVERLLSCP
KEDDIKGIRD KAMLELLYAT GIRVSELINL NLDDINLEHG YIICKNKKRD RVIPIGSYAI
SAVEKYLRHS RPYLAKSKDE EALFLNFSGE RMTRQGFWKI VKFYAQNAKI DKEITPHVLR
HSFATHLIEN GADVRAVQQM LGHADISTTQ RYLQVANVKL KEVYQKTHPR A