Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Athe_1786 |
Symbol | |
ID | 7408573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerocellum thermophilum DSM 6725 |
Kingdom | Bacteria |
Replicon accession | NC_012034 |
Strand | - |
Start bp | 1860146 |
End bp | 1861021 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643716163 |
Product | tyrosine recombinase XerD |
Protein accession | YP_002573652 |
Protein GI | 222529770 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0596225 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTATCA TAGAAGCGTT TGGTAATTAC CTCCAGAGAC AGAATAGATT TTCACAGAAT ACTATAAGTT CGTATTTACG GGACGCTAAA AAATACATAG AGTTTTTAGA TGACATAAAA ATAAAACTTG AAAATACTTC TCAGACAACA TTGATAGCAT ACATTATCAG TATGCAAAAA GGTGGTAAAT CAAACAGTAC TATTGCACGT GCAATTGTTT CACTAAAAGT CTTTTATGAA TTTCTAAAAA TTCAGGATAT TGTTGATATT GGAAAGATTG AGATTGAACC TCCAAAACTT GAAAAAAGTC CACCTCAGAT ACTTACAAGA GATGAGGTGG AAAGGCTTCT TTCATGTCCG AAAGAGGATG ATATTAAAGG AATCAGAGAT AAAGCAATGC TTGAGCTTTT GTATGCAACA GGTATCAGGG TAAGCGAGCT TATAAATCTC AATCTTGACG ACATCAATCT TGAACACGGA TATATTATTT GCAAAAACAA GAAAAGAGAC AGAGTTATTC CCATTGGTTC ATATGCCATT TCGGCAGTGG AGAAGTATTT GCGTCATTCA CGACCTTACC TTGCAAAAAG TAAAGATGAA GAAGCTCTTT TTTTGAACTT TAGCGGTGAA AGAATGACAA GACAGGGATT TTGGAAGATA GTAAAGTTTT ATGCACAAAA TGCAAAGATA GATAAAGAAA TAACACCGCA TGTGCTCAGA CACTCTTTTG CCACTCATCT AATTGAAAAT GGTGCGGATG TGAGAGCTGT TCAGCAAATG CTTGGCCATG CTGATATTTC CACAACACAG AGATACCTTC AAGTTGCAAA TGTTAAGCTA AAAGAGGTGT ATCAAAAAAC CCATCCACGT GCATAA
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Protein sequence | MSIIEAFGNY LQRQNRFSQN TISSYLRDAK KYIEFLDDIK IKLENTSQTT LIAYIISMQK GGKSNSTIAR AIVSLKVFYE FLKIQDIVDI GKIEIEPPKL EKSPPQILTR DEVERLLSCP KEDDIKGIRD KAMLELLYAT GIRVSELINL NLDDINLEHG YIICKNKKRD RVIPIGSYAI SAVEKYLRHS RPYLAKSKDE EALFLNFSGE RMTRQGFWKI VKFYAQNAKI DKEITPHVLR HSFATHLIEN GADVRAVQQM LGHADISTTQ RYLQVANVKL KEVYQKTHPR A
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