Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Athe_1778 |
Symbol | |
ID | 7408565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerocellum thermophilum DSM 6725 |
Kingdom | Bacteria |
Replicon accession | NC_012034 |
Strand | - |
Start bp | 1851643 |
End bp | 1852383 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643716155 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_002573644 |
Protein GI | 222529762 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00599457 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGAGTTG TGGAAAGTTT TGAATCAGTA GGATATCCCC AAAGGTATGA GCTTGTATTA AGAAAATTAA AGCAACTCAT TGAAGAGAAA TTTAAAGAGG GGGACAAACT TCCATCCGAA TTGGAACTGG CGAAGCTTTT TGGTGTGAGC AGAGCGACGC TCAGAGAAGC TTTAAGAATA TTAGAAGAAG AAGGATATGT TGTAAGAAAA CATGGTGTTG GGACTTTTGT CTCATCACGA CCAATTTTAC AATCTGGAAT GGAAGAGCTT CAGAGTATAA CGAAGTTAAT GGAAAAACAG GGATACAAGC CGCACACGAA AGATATTATT GTTACCAAAA CCTATCCAAA CGCAAAAGAG GCTCATATGC TCAGAATATC ATCAACTGAA GAGATTATCA AGATAGAAAG AGTACGACTT GCTGAGAGTA TTCCCGTTGT ATATTGTGTT GATAGACTTC CTGCAAAGCT CTTTTCATCT GAGTTTAAAT TTGTAGGAGA GTCGTTATTT GACTATTTAA ATGATAAACT GGGAGTATAT ATTGCATATG CAATCTCTGA TATTATCCCA ATGCTTGCTG AAAAAAATAA TGTTTATAAA AAGCTTAACC TTGAAAAGAA CGATGTTGTT CTTTTGCTTG ACCAGGTTCA TTTTGACCAA AATGACATTC CAATTTTGTA TTCTTCAAAT TATTTTTCAC CCAAAAAATT CAGATTCTAT ATTGTAAGAA AGAGGGTATA A
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Protein sequence | MRVVESFESV GYPQRYELVL RKLKQLIEEK FKEGDKLPSE LELAKLFGVS RATLREALRI LEEEGYVVRK HGVGTFVSSR PILQSGMEEL QSITKLMEKQ GYKPHTKDII VTKTYPNAKE AHMLRISSTE EIIKIERVRL AESIPVVYCV DRLPAKLFSS EFKFVGESLF DYLNDKLGVY IAYAISDIIP MLAEKNNVYK KLNLEKNDVV LLLDQVHFDQ NDIPILYSSN YFSPKKFRFY IVRKRV
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